Salvelinus namaycush (lake trout): 120025852
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Entry
120025852 CDS
T07522
Name
(RefSeq) 3'-5' exoribonuclease 1-like
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120025852
03036 Chromosome and associated proteins [BR:
snh03036
]
120025852
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120025852
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
120025852
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Motif
Other DBs
NCBI-GeneID:
120025852
NCBI-ProteinID:
XP_038826482
UniProt:
A0A8U0PK86
LinkDB
All DBs
Position
Sna31:33462093..33464476
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AA seq
341 aa
AA seq
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MEEYKENIQDKGDNVKLSSKPEEDDKSCNKVCSNIGEPVPQVSSTRGEFSDPVYKEIALA
NGQINRMNKDELRSKLAECKLDTRGVKDVMKKRLKNYYKKQKLSLMQSVTEGGPTDAYYD
FICVVDFEATCEQDNPLDFTHEIIEFPMVLFNTHTLDIEDSFQEYVRPEVNTQLSEFCIK
LTGITQKMVDEADTFPNVLKRVVLWLQEKELGTKYKYAILTDGSWDMSKFMNTQCRLSRL
RYPQFAKKWINIKKFYGNFYKVPRTQTKLSSMLEKLGLQYEGRPHSGLDDSRNIARIALR
MLQDGCQLRINERMHEGQLRTVPSSAPVEGAPPPHTPRSRD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatacaaggagaatattcaagacaagggtgacaatgtgaaattgtcttctaaa
cccgaggaagatgacaagtcttgcaacaaggtgtgtagtaacattggtgaacctgtccct
caagtatcttctactcgtggcgagttcagtgatcctgtttacaaagagattgctcttgca
aatggacagatcaaccgcatgaacaaggatgagcttcggtctaaactggcagagtgtaag
cttgacacaagaggtgtgaaggatgtgatgaagaagcggttgaagaactactacaagaag
cagaagctgtctttgatgcagtctgtgacagagggtggaccaactgatgcctactacgac
ttcatctgtgtggtggactttgaggcaacgtgtgaacaggacaacccccttgacttcacg
catgaaatcattgagttcccaatggtcctgttcaacacccacactttagacattgaggac
agctttcaggaatatgtcaggccagaagtcaacacacagctgtcagagttctgcataaag
ttgacagggataacacagaaaatggtggatgaagcagacacattccccaatgttcttaag
cgggtggtgctttggcttcaggagaaagagcttggcacaaaatacaaatatgccattctt
acagatggatcttgggacatgagcaagttcatgaacacccagtgccgtttaagtcggctc
agatatccacagtttgcaaagaagtggatcaacatcaagaaattctacggaaacttctat
aaggtccctcgtacccagaccaagctgagcagcatgctagagaagctgggacttcaatac
gagggccgccctcactctggcctggatgactcgcgcaacattgctcgcattgcgctgcgc
atgctgcaggacggctgccaactgcgcatcaacgagcgcatgcacgaaggacagctgcgg
actgtgcccagctctgcccccgtggaaggagccccacccccacatactcctcgcagcaga
gactag
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