Salvelinus namaycush (lake trout): 120025856
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Entry
120025856 CDS
T07522
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120025856
Enzymes [BR:
snh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
120025856
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120025856
Prokaryotic type
120025856
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GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
120025856
NCBI-ProteinID:
XP_038826485
UniProt:
A0A8U0PK34
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Position
Sna31:complement(20855015..20858751)
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AA seq
392 aa
AA seq
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MMSEEGSGNMLIKPLKRVEEGNGESGENGHIRKKLKSVELTGNERKHPKRKVVLLLAYSG
KGYYGMQRNAGSSQFKTIEDELVTALIKSGCIPDNHGDDMKKMSFQRCARTDKGVSAAGQ
VVSLKLWMIEDVMEKINSNLPPQIRVLGLKRVTGGFNSKNSCDARTYSYMLPTVAFSPKD
YYTKNSAAFRLEPETLQRVNQLFGSYKGTHNFHNFTSQKAARDPSARRYITEMSCGEPFV
RGGAEFAEITVRGQSFMMHQIRKMIGLVIAVVKGYSGDEVLKRSWGEEKVDVPKAPGLGL
VLEKVHFDRYNKRFGGDGLHECLEWTEEEQAILAFKEEHIYPSIVETECQEGSMASWMAT
LPIHDFEATATGAQDKDREQDDEEGNRSDSAL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgaagaagggtcaggaaatatgctgatcaagccactgaaacgagtggaggaa
ggaaatggagagtcgggtgagaatggacacatcagaaagaagctgaagtctgtagaactg
actggcaacgagaggaaacaccccaaaagaaaagtggtcctgcttttggcatattcaggc
aaaggttactacggtatgcagagaaatgctggatcctcccagttcaaaaccattgaggat
gagctggtcacagcactgattaagtctgggtgcatcccagacaaccatggagatgacatg
aaaaaaatgtcgttccaaagatgtgcgagaacagacaagggtgtttctgcagcaggtcaa
gtggtctctctaaaactgtggatgattgaagacgtaatggaaaagataaactccaatctt
ccaccacagatcagagtgctgggtctgaaacgagtgactgggggcttcaattctaaaaac
agctgtgatgcccgcacatactcctacatgcttcccactgtggccttctccccaaaggac
tattacaccaagaattccgctgcattccgccttgagccagagacactgcagagagtaaac
cagctgtttggcagctacaagggcacccataactttcacaacttcacctctcagaaggcc
gcacgggaccccagcgcccgtcgctacatcacagagatgtcctgtggcgagccctttgtg
cgtggcggcgcagagttcgcagagattactgtgcgtggccagagcttcatgatgcatcag
atccggaagatgatcggcctggtgatagctgtggtgaagggatattcgggggacgaagtg
ttaaagcgaagctggggtgaggagaaagtggacgtgcccaaagcccccgggctgggcctg
gtgctggagaaggtgcactttgacaggtacaacaagcggtttggtggggacggcctccat
gagtgcctggagtggactgaagaggagcaggccatcttggctttcaaggaggagcacatc
taccccagcattgtggagacagagtgccaggaagggtccatggctagctggatggccaca
ctgcccatacatgactttgaggcaactgcaacaggagctcaggataaggatagggagcag
gatgatgaggagggtaatagatcagattctgcactttga
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