Salvelinus namaycush (lake trout): 120025892
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Entry
120025892 CDS
T07522
Name
(RefSeq) synaptobrevin homolog YKT6-like
KO
K08516
synaptobrevin homolog YKT6
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04130
SNARE interactions in vesicular transport
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120025892
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120025892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120025892
Membrane trafficking [BR:
snh04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
120025892
SSDB
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Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
DUF8415
MA3
Motif
Other DBs
NCBI-GeneID:
120025892
NCBI-ProteinID:
XP_038826535
UniProt:
A0A8U0TSJ8
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All DBs
Position
31:13561815..13572742
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AA seq
198 aa
AA seq
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MKLFSLSVLYKGTTKSNLLKAAYDLSSFSFFQKSSVQEFMTFTSDLIVQRSSIGSRASVK
EQEYLCHVYVRNDSLGAVVIADGEYPSRVCFTLLDKVLEEFSRQVSSIDWPSGSPDTVHY
TALDSYLAKYQNPREADAMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttcagtctgagtgtgctgtataaagggaccaccaagtctaacctactgaaa
gctgcctacgacctgtcatccttcagcttcttccagaagtccagtgttcaggagttcatg
acattcaccagtgacctcatagttcaacgctcgtctatagggagccgagcctctgtcaaa
gaacaagagtacctgtgtcacgtgtatgtgaggaacgactccctgggtgcggtggtgatt
gctgacggagagtatccctctagagtgtgcttcaccctactggataaggtgctggaggaa
ttttccagacaggtgagcagtatagactggccctctggttctcctgacactgtccactat
actgccctggacagctacctcgccaagtaccagaatcctcgggaggcggacgcaatgagt
aaagtacaagctgagctggacgaaaccaaaataattctgcacaacactatggaaagtctg
ttggagagaggagagaagctggatgatctagtccagaagtcagaacacctggggaaccag
tctaaagccttctacaagacggcgcggaagcagaactcttgctgtgaggtcatgtga
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