Salvelinus namaycush (lake trout): 120025926
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Entry
120025926 CDS
T07522
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120025926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120025926
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120025926
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
120025926
BRITE hierarchy
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Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
120025926
NCBI-ProteinID:
XP_038826574
UniProt:
A0A8U0TSY7
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Position
Sna31:complement(26219268..26222406)
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AA seq
295 aa
AA seq
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MAADMRLPTIRKQVALSSSLSALDGKDLVVPGDVITSDTGFMRGHGTYMDEEKLTASVAG
EVERVNKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGG
ELRRRSAEDELTMRDYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSL
IKRQKTHFHNLPCGASIILGNNGFVWLYPTPGHQDEEAGGYYTSLEPVSLSDREVISRLR
NCLLALGAHKVLLYDTSVLYCYESSLPHQIKDILKPEVMEEIVMMTRQKLVELEG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggatatgagattgccaactattcggaaacaagtagcgttatcatcctctctg
tctgctttggatggaaaagatctagttgttcccggtgatgtgatcacatcagatacaggg
tttatgaggggtcatgggacttacatggatgaagaaaaactaacagcctctgtggctgga
gaggtggagagagtgaacaagctcatctgtgtacggccgctcaagaccaggttcaacggg
gaggttggagatgtggtggttgggaggatcacagaggtgcagcagaagcgctggaaggtg
gagaccaactccagactggactctgtgttgctgctgtcctctgtcaatctgcccggagga
gagctgaggagacggtcagcagaagatgagctcaccatgagagactaccttcaggagggg
gacctcatcagtgcagaggtacagtctgttttctcagatggagcgctctctcttcacacc
cgcagtttaaagtatggaaagttggggcaaggagttcttgtgcagctatctccctctctg
atcaagagacagaaaacccacttccacaacctgccttgtggggcctccatcatcctgggc
aataatggctttgtgtggctgtaccccaccccaggacatcaggacgaggaggctggagga
tactacaccagtctggagcctgtctctctctcagatcgggaggtgatctcacggttgagg
aactgcttgctggccttgggggcacacaaggtgcttctgtacgacaccagtgtgctctac
tgttacgagtcatcactcccacaccagatcaaggatatcttaaaaccagaggtgatggag
gagattgtgatgatgacgcgtcagaaacttgtcgaactggagggttag
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