Salvelinus namaycush (lake trout): 120025939
Help
Entry
120025939 CDS
T07522
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03420
Nucleotide excision repair
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120025939 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
120025939 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
snh03051
]
120025939 (rad23b)
03400 DNA repair and recombination proteins [BR:
snh03400
]
120025939 (rad23b)
Proteasome [BR:
snh03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
120025939 (rad23b)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120025939 (rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
Dsc3_N
Ubiquitin_5
Ubiquitin_4
CUE
Motif
Other DBs
NCBI-GeneID:
120025939
NCBI-ProteinID:
XP_038826598
UniProt:
A0A8U0PL79
LinkDB
All DBs
Position
Sna31:44656485..44675624
Genome browser
AA seq
388 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDAEETVKTLKEKIENEKGKDGFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVAKPKAAPAAAQPSSATTTTTSITTVPTVPAAALSGSDNPPEEGKPE
DKPAEERPSNTSAPASTPTSSSGLLANVNMFEEATSALVTGQSYENMVTEMMLMGYEREQ
VVASLRASFNNPDRAVEYLLTGIPAGEEGHVSADPVVPPVGGGTPALNTGSMTTPASTGS
LASAATGANPLGFLVNQPQFLQMRQIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFI
QMLNEPAQEGGQGGGGGGVGGGSVGVGVGGEAGSGMNYIQVTPQEKEAIERLKALGFPEG
LVIQAYFACEKNENLAANFLLQQNFDDD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcagataacattgaaaactctccaacagcagacatttaaaatcgacatagacgcagag
gagacggtaaaaaccttaaaggaaaaaattgagaatgagaagggaaaagatggttttccg
gttgctggacagaagttgatatatgcagggaaaatcctaaatgatgacacagccctcaag
gagtataagattgatgagaagaactttgtggtcgtcatggtggcaaagcctaaagcagcc
ccagcagctgcccagccttccagtgctaccacgaccaccacctccatcactacagtcccc
acagtacccgctgctgccttgtcaggctcagataacccacctgaggagggcaaaccagag
gacaaaccagctgaggagaggccctccaacacctcagccccagcatcaactccaaccagt
tcgtctggtctcttggccaatgtgaacatgttcgaggaggcaacttctgctttagtgaca
ggccaatcgtatgagaacatggtgaccgagatgatgctgatgggctatgagagggagcag
gtggtggcatcactccgagccagcttcaacaacccagatagagctgtggagtacctgctt
acagggatcccagctggggaggagggccatgtgagtgctgacccagtggtgccccctgtg
ggtggaggaactccagctctgaacacaggcagtatgaccaccccagccagcacaggctcc
ctagccagcgctgcaacaggagccaaccctctggggttcctggttaaccagcctcagttc
ctccagatgagacagatcatccagcagaacccctctctgctccctgccttactacagcag
atagggagggagaacccccagcttctgcaacaaatcagcagccaccaagagcagttcatc
cagatgctgaacgagccagctcaggaggggggtcagggaggaggaggaggaggagtaggt
ggaggaagtgttggagtcggggtcggtggggaggctggaagtggcatgaactatattcag
gtcacaccccaggagaaggaggccattgagaggctaaaagccctaggattccctgaagga
cttgttatacaggcctactttgcctgtgagaagaacgagaacttggccgctaacttcctt
ttacaacagaattttgacgacgactaa
DBGET
integrated database retrieval system
