Salvelinus namaycush (lake trout): 120025975
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Entry
120025975 CDS
T07522
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04210
Apoptosis
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120025975 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120025975 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120025975 (sptan1)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120025975 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
120025975 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
120025975
NCBI-ProteinID:
XP_038826669
UniProt:
A0A8U0PMU1
LinkDB
All DBs
Position
Sna31:complement(17253998..17305634)
Genome browser
AA seq
2468 aa
AA seq
DB search
MATTSPQRMDTSGVKVLESADDIQERRQQVLDRYRRFKELSGVRRQKLEDSYRFQFFRRD
ADELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANAGAIIKLDETGNLMISE
GHFASETIRTRLEELHRLWDLLLQKTKEKGVRLLQAQKLVQYLRECEDALDWISDKEAMA
TSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQLAGKLSQESHPEAELIVRKQEE
VNAAWQRLKGLAQQRQGRLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQA
LLRKHEGLERDLAALEDKVNTLGGEAERLQQTHPQNASQIHLKRDELITNWEQIRTLAAE
RHARLNDSYRLQRYTSDFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDA
HEDSFKATDEAGQALLNTGHYASEEVKEKLSVLTEEKESLLELWEVRRQQYEQCMDLQLF
YRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATK
LIQNNHYAKEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFSRDSDELKSWINEK
MKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYAADEVSVR
MDEVSSQWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTS
VQNLQKKHALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIKRKQEALMARYDALRDP
MAARKQKLSDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAE
IAGHEPRIKAVTQKGEAMVEEGHFAGEEVKVKLEELNGRWDTLKGKAGQRRQDLEDSLQA
QQYFADANEAESWMREKEPIVSSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALKEQ
AQTCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDR
QGFVPAAYVKKLDPTQSSSRENLLDEQGSIGLRQDQIENQYGTLQELGEKRKDMLEKSCK
KFMLFREANELQQWINEKEGALTNEEVGSDLEQVEVLQKKFDDFQKDLKANESRLRDINK
VASELESEGLMAEEATMVQAQEQVMLGSAPGQDEADNKNASPWKNVRLAVQTTANFNTIK
ELNNRWRSLQQLAEERSNMLGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQ
ALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTELNTAWSSLVGRAD
QRKDKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSEELAKDVTGAEALLERHQEHRTEID
ARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDHERADLEKAWVQRRMMLDQCLELQL
FNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQSFAD
QLVGADHYAKPEIFNRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISE
KLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTGNALIHRGACSG
SEDAVQSRLGALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEALLASE
DYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLTASTAFDPTQVKDKRDAVNG
RFAKIKSMATGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYGRDLTGVQNLRK
KHKRLEAELGAHEPAIQSVQDTGKKLSDDNTIGQDEIEQRLAQFEEHWMELKDLAAARGQ
RLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHEAFETDFSVHRD
RVNDVCSNGDELIKKNNHHVDSISAKMASLRGKVSELERAAAMRKAKLDENSAFLQFNWK
ADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGITNITALKDQLL
AAKHVQSKAIEARHAALMKRWNQLLDNSQARKKKLLEAQEHFRKVEDLFLTFAKKASAFN
SWFENAEEDLTDPVRCNSLEEIRALRDAHEAFRSSLSSAQADFNQLAELDRQIKSYQVVS
NPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQWLQET
RTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTE
HSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEDALKEFSMMFKHFDKEKSGRLN
HQEFKSCLRSLGYDLPMVEEGEPDPEFESILDTVDPNRDGNVSLQEYMAFMISRETENVK
SSEEIESAFRALSVDAKPYVTKEELYQNLSKEQADYCISHMKPYLDSKGREMPSAFDFVE
FTRSLFVN
NT seq
7407 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacctctcctcagagaatggataccagtggggtgaaagtgctggagtctgct
gatgacatccaggagcgccggcagcaggtgttggaccgctaccggcgcttcaaggagctt
tcgggtgtgcgacggcagaagctggaggactcgtaccgcttccagttcttccgccgcgat
gctgacgagctggagaagtggatccaggagaagctgcagatcgcctctgatgagaactac
aaggaccctaccaacctccagggcaagctccagaaacatcaggccttcgaggcggaggtg
caggccaacgctggagccatcattaagctagacgagactggcaaccttatgatctccgaa
ggccactttgcctccgaaaccatccgcactcgtctggaggagcttcaccgtctttgggac
ctgctgctgcagaagaccaaggagaagggtgtccgtctgctgcaggcccagaagctggtg
cagtacctgcgcgagtgtgaggatgccctggactggatcagtgacaaggaggccatggcc
acctcggaggagctgggccaggacctggagcacgtagaggtgctccagaagaagtttgag
gagttccagacggacctggcagcccacgaggagcgtgtgaacgaggtgaaccagctggcg
ggcaagttgagccaggagtcccaccccgaggcggagctcatcgttcgcaagcaggaggag
gtgaacgccgcctggcagaggctcaagggcctggcgcagcagaggcagggcaggctgttc
ggagccgccgaggtacagagatttaacagggatgtggacgagaccattagctggatcaag
gagaaggagcagctcatggcatccgatgactttggccgggacctggccagcgttcaggct
ctgctgcgcaagcatgagggcctggagagagacctggctgccctcgaggacaaggtcaac
actctgggcggagaggctgaacgtctgcagcagacccacccccagaacgcctcccagatc
cacctgaagagggatgagctcatcaccaactgggagcagatccgcacgctggccgccgag
cgccacgctcgcctcaacgactcctacaggctgcagcgctacacttcagacttccgtgac
ctgaccagctgggtgacggagatgaaggccctgatcaacgctgatgagctggccaacgac
gtggctggagctgaggctctcctcgaccgccaccaggaacacaagggtgagattgacgcc
catgaggacagcttcaaagccacggacgaggccggccaggctctgctcaacactggacac
tacgcctcagaggaggtcaaggagaagctgagtgtactgactgaggagaaggagtctctg
ctggagctgtgggaggtgcgcaggcagcagtacgagcagtgcatggacctgcagctcttc
tacagggacacggagcaggtcgacaactggatgagcaagcaagaggcgttccttctgaac
gaggatcttggtgactctctggacagcgtggaggccctgctgaagaaacacgaggacttt
gagaagtccctcagcgcccaggaggagaagatcactgccctggatgaatttgccaccaaa
ctgatccagaacaaccactacgccaaggaggatgttgccactcgtagagatgctctgctg
agccgccgtaacgccctgcatgagcgtgcccagtcccgccgcgccgccctggaggactcc
ttccacttgcagcagttctcccgcgactcggacgagctcaagagctggatcaatgagaag
atgaagacggccaccgacgaagcctacaaggatccgtccaacttgcagggcaaggtccag
aagcaccaggccttcgaggcggagctgtcagccaaccagagccgcatcgacgcgctgcag
aagtctggacaggagctcctggacggaaagcactacgccgccgacgaagtgtcggtccgc
atggacgaggtcagctcccagtggaagaagctgctggaggccactgagctcaaaggcatc
aagctgcgtgaggctaaccagcagcagcagttcaacaggaatgtggaggacattgagctg
tggctttacgaggtggagggccacctggcctccgatgactacggcaaggacctgaccagc
gtccagaacctgcagaagaaacatgccctgctggaggccgatgtggccgcacaccaggac
cgcattgacggcatcaccatccaggcgcgtcagttccaggaggcgggccactttgacgct
gacaacatcaagcgcaagcaggaggcgctgatggcgcgctacgacgcccttcgcgaccct
atggctgcccgcaagcagaagctatcggactcgctgcggctgcagcagctcttcagagat
gtggaggacgaggagacctggatccgggagaaggagcccatcgccgcctccaccaaccgg
ggcaaagacttgattggcgttcagaacttgctgaagaagcaccaggccctgcaagcggag
atcgccggccacgaaccccgcatcaaggctgtcacccagaagggagaggccatggtggag
gaaggtcactttgccggagaggaggtgaaggtgaagctggaggagctgaacggccgctgg
gacaccctgaagggcaaggccgggcagcgcaggcaggacctggaggattcgctgcaggcc
cagcagtactttgccgacgccaacgaggcagagtcctggatgagggagaaggagcccatt
gtgagcagccccgactacggcaaggacgaggactctgctgaggccctgctgaagaagcac
gaagccctgatgtctgacctgagtgcctatggaagcagcatccaggctctgaaggagcag
gcccaaacctgtaggcaacaagtggctcccaccgatgatgagacgggtaaagagctggtg
ctggccctctatgactaccaggagaagagcccccgcgaggtcaccatgaagaagggagac
atcctcaccctgctcaacagcactaacaaggactggtggaaggtggaggtgaacgaccgc
cagggttttgttccggcagcctacgtcaagaagctggatcccacccagtcctcttccaga
gagaacctgctggatgagcagggcagcatcggcctgcgccaggatcagattgagaaccag
tacggaactctccaggagctgggcgagaagcgcaaggacatgctggagaagagctgcaag
aagttcatgctgttccgcgaagccaacgaactacagcagtggattaacgagaaggaggga
gccctcaccaatgaggaggtgggctccgacctggagcaggtggaggtgctgcagaagaag
tttgacgacttccagaaggacctgaaggccaatgagtctcgtctgagggacatcaacaag
gtggcgtctgagctggagtctgagggcctgatggccgaggaggcaaccatggtccaagct
caggaacaagtgatgctgggatctgctcctggccaggatgaggctgataacaagaatgcc
tctccatggaagaatgtacgcttggctgttcaaacgacggctaactttaatactatcaag
gagctgaacaaccgctggagatccctgcagcagctggccgaggagaggagcaacatgctg
ggcagtgcccacgaagtgcagaggttccacagggatgcggatgagaccaaggagtggatc
gaggagaagaaccaagcgctgaacacagacaactatggccacgacctggccagcgttcag
gcccttcagcgcaaacacgagggctttgagagagacctggccgccctgggagataaggtg
aactccctgggggagacagcggagcgtctgatccagtcccacccggaggcggtggacgac
atccaggagaagtgcacagagctcaatacggcctggagcagcctggtggggcgcgccgac
cagcgaaaggataagctaggcaactcccacgacctgcagcgcttcctctccgacttcagg
gacctcatgtcctggatcaacggcatccgaggcctggtgtcctcagaagagctggccaag
gacgtgaccggggctgaggccctgctagagagacaccaggagcaccgtactgagatcgac
gcccgtgcgggcaccttccaggcctttgagcagtttggccagcagctgttggcgcgcggc
cactacgccagccctgagatccagcagaagctggaggccttggaccacgagagggcagac
ctggagaaggcctgggtgcagagacgaatgatgctcgaccagtgcctggagctccagctg
ttcaaccgtgactgtgaacaggctgagaactggatggcggctcgcgaggccttcctggcc
agcgacgacaagggtgactccctggacagcgtggaggctctcatcaagaaacacgaggac
tttgacaaggccatcaacgtgcaggaggagaagatcgctgctctgcagtcctttgcagac
cagctggttggcgcggatcattatgccaaaccagagatattcaaccgtcgcaatgaagtc
ctggacaggtggcgccgtctgaaggctcagatgattgagaagcgctccaagctgggcgag
tcccagacgctgcagcagttcagccgcgacgtggacgagatagaggcctggatcagcgag
aagctgcagacagctacagatgagtcctataaggaccccaccaacatccagctgtcgaag
ctgctgagtaagcaccagaagcaccaggccttcgaggcggagttgcatgccaacgcagac
cgcatccgtggggttatcgacactggcaacgccctcatccatagaggggcctgctccggc
agtgaggatgcggttcagtcgcgtctgggtgctctggacgagcagtggcagttcctggtg
aacaagtcggcagagaagagccagaagctgaaagaagccaacaagcagcagaacttcaac
actggcatcaaggactttgacttctggctctctgaggtcgaggcccttcttgcctctgag
gattatggcaaagaccttgcctcagtcaacaacctgctgaagaaacaccagcttctggaa
gccgacatctctgctcatgaggatcgtctgaaggacctgaacggccaggctgacagcctg
acggccagcacggccttcgaccccacccaagttaaggacaagcgcgacgccgtcaatgga
cgcttcgccaagatcaagagcatggccactggccgccgtgcaaagctcaacgagtctcac
cgcctgcaccagttcttcagggacctggacgacgaggagtcttggatcaaagaaaagaaa
ttgctagtgagttcggaggactatggacgtgatttgacaggagtgcagaatctgaggaag
aaacacaagaggctggaggctgagttgggggcccatgagccggccatccagtctgtgcag
gacacagggaagaagctgtctgatgacaacaccatcggccaggatgagattgagcagagg
ctggcccagtttgaggagcactggatggagctgaaggacctggctgcagccaggggacag
aggctggaggagtcgctggagtaccagcagtttgttgcgaatgttgaagaggaggaagcc
tggattaacgagaagctgaacctggtgggaagtgaagactacggggataccctggctgct
gtgcagggcctgttgaagaagcatgaggcgtttgagactgacttctccgtgcacagggac
agagtgaatgacgtgtgttccaacggagacgagctcattaagaagaacaaccaccacgtg
gacagcatctcagccaagatggcgtccctgcggggcaaggtgtctgagctggagagggcc
gctgcaatgagaaaagcgaagctggatgagaactctgctttcttgcagttcaactggaag
gctgacgtggtggagtcctggatcggcgagaaggagaacagcctgaagactgatgactac
ggacgagatctctcatctgtgcagaccttgctcactaagcaggagacgtttgacgcaggg
ctgcaggccttccagcaggagggtatcaccaacatcacggcccttaaggaccagctgctg
gcggccaagcacgtccagtccaaggccatcgaggcgcgccacgctgccctcatgaagcgc
tggaaccagcttctcgacaactcacaggcccgcaagaagaaactgctggaggcccaggag
cacttcaggaaggtggaagacctgttcctgacctttgccaagaaggcgtcggccttcaac
agctggtttgagaacgctgaggaggacttgacagatccggtgcgctgcaactcgctggag
gagatccgggcgctgcgcgacgcccacgaggccttccgctcatcgctgagctcggcgcag
gccgacttcaaccagctggccgagctggaccggcagatcaagagctaccaggtggtgtcc
aacccctacacctggttcactatggaggccctggaagagacctggaggaacctgcagaag
atcatcaaggaacgagagctggagctgcagaaggagcagaggaggcaggaggagaatgac
aagctgcggcaggagtttgcgcagcacgccaatgcattccaccagtggctgcaggagacc
aggacatatcttctggatgggtcctgcatggtagaagagtccggaaccttggaatcacaa
cttgaggcaaccaagcgcaagcaccaggagatccgggcaatgcgtagccagctgaagaag
attgaggaccttggcgcggccatggaggaggctctgatcctggacaacaagtacacagaa
cacagcacggtgggcctggcccagcagtgggaccagctagaccaactgggcatgaggatg
cagcacaacctggagcagcagatccaggccaggaacaccactggagtgacagaggatgcc
ctgaaggagttcagcatgatgttcaagcactttgacaaagagaagtctggccgtctgaac
caccaggagttcaagtcgtgtctgcgctcgctgggttacgacctgcccatggtggaggag
ggagagccagacccagagtttgagtccatcctcgacacggtcgaccccaacagggatggc
aacgtgtccttgcaggagtacatggccttcatgatcagccgcgagacagagaacgtcaag
tccagcgaggagattgagagcgccttccgagccctcagcgtcgatgcgaagccctacgtt
accaaggaggagctctaccagaatctgtccaaggaacaggcagactactgcatctcgcac
atgaagccctacctagacagcaagggccgggaaatgccctcggccttcgactttgtcgaa
ttcacccgctcgcttttcgtcaactga
DBGET
integrated database retrieval system
