Salvelinus namaycush (lake trout): 120025987
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Entry
120025987 CDS
T07522
Symbol
sptlc1
Name
(RefSeq) serine palmitoyltransferase 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00600
Sphingolipid metabolism
snh01100
Metabolic pathways
snh04382
Cornified envelope formation
Module
snh_M00094
Ceramide biosynthesis
snh_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120025987 (sptlc1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120025987 (sptlc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snh01007
]
120025987 (sptlc1)
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
120025987 (sptlc1)
Amino acid related enzymes [BR:
snh01007
]
Aminotransferase (transaminase)
Class II
120025987 (sptlc1)
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GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
PAD
Motif
Other DBs
NCBI-GeneID:
120025987
NCBI-ProteinID:
XP_038826689
UniProt:
A0A8U0TRL8
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Position
Sna31:4464978..4483864
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AA seq
472 aa
AA seq
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MASGQQWVLVEMVQALYEAPAYHLVLEGILILWIIRLLFSKTYKLQERSDLTEKEKEDLI
EEWQPEPLVPPMSKDHPSLNYDIVTGPPSHKIIVNGKECINFASFNFLGFLDNERVKQKA
LTSLRRYGVGTCGPRGFYGTFDVHLELEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKR
GDIVFVDEAACFSIQKGLQASRSFIKYFKHNDMEDLERLLKEQEIEDQRNPRKARVTRRF
IIVEGLYINTADVCPLPDLVKLKYKYKVRIFLEESMSFGVLGEHGRGVTEHFGVNIDDID
LISANMENAVASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPMLAAAAIEALNIMEEDPE
IFTILREKCKHVHKALQESPGMKVVGEAYAPALHLQLERSSGSRDTDVRMLRSIVDYCLE
RQIALTLARYLDKEERFLPPPSIRVVVTIEQTEEEIEKATSCIKEAALAILK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggcagcagtgggtgttagtggagatggtacaagcactctacgaggcacct
gcctaccatctggtcttggaggggatcctcatactgtggatcatcagactgctgttttca
aagacgtacaaactacaggagcgttcagacctcacagagaaggaaaaggaggacttaatt
gaagaatggcaaccagaaccccttgtccctcctatgtccaaagaccatccttccctcaat
tatgacatagtcactggcccaccaagccacaaaatcattgtaaatggaaaagagtgcatt
aactttgcttcatttaacttcttgggtttccttgacaacgagcgagtgaagcaaaaggcc
ttgacttctctcaggaggtatggtgttggtacctgtggtccaagaggtttctatggaacc
tttgatgtccacttggagttagaggatcgtttggccaagttcatgaaaacagaggaggcc
atcatctattcctatggctttgcaacgatagctagtgcaatacctgcctactccaagaga
ggagacatagtgtttgtggatgaggcagcatgtttctccatacaaaagggtctccaagcc
tcccgcagtttcatcaagtacttcaaacacaacgacatggaagatctggagagactgctc
aaagagcaggagatcgaggatcagaggaatcctcggaaggccagagtgaccaggaggttc
atcatagtggaggggctgtatataaacactgcagatgtttgtccccttccagacctggtg
aagctgaagtacaagtacaaggtccgcatcttcctggaggagagtatgtcgttcggggtg
ctgggagaacatggcagaggggttacggaacactttggggtcaacattgacgatattgac
ctcattagtgccaacatggagaacgctgtggcttccataggcggcttctgctgtggaagg
tcgttcgtcatagaccatcagcgtctctcaggccaggggtactgtttctctgcctccctg
ccccccatgctggctgctgcagccatagaggcccttaacatcatggaggaagacccagaa
atttttaccatcctgagggagaagtgcaaacacgttcacaaagcgttgcaagaaagtcct
gggatgaaggtagtaggggaagcttatgcccctgcgcttcacctacagctagagagaagc
tctggatccagagacacggacgtgaggatgcttcgcagcatcgtagattactgtttggag
agacagatcgcactcaccctagctcggtacttggataaagaggagcggtttctccctccg
ccttcgatccgggtagtggtcaccatcgagcagacagaagaggagattgagaaagctaca
tcctgcatcaaagaggcagctctggctatcctcaaatga
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