Salvelinus namaycush (lake trout): 120026003
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Entry
120026003 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120026003
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120026003
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120026003
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
DUF6244
Di19_C
zf-C2H2
Zn_SUZ12
TFIIA
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
120026003
NCBI-ProteinID:
XP_038826708
UniProt:
A0A8U0PKA9
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Position
Sna31:40380129..40403525
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AA seq
393 aa
AA seq
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MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHAMQCILTRVD
FDLYYGGEAFSVEQPQSFSCPYCGKMGYTETSLQEHVASEHTETSTEVICPICAALPGGD
PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRTNMHFTSSSTGG
LSSSQSSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQ
QAQAARQQLETARNTTRRSNPGGNISATIPPPSAVANSAGVAESNPMASHSSQFLLTRLN
EPKMSEAERQALEGERADRSLFVQELLLSTLMREESSSSDEDERRDFASFGAMGCVDIMP
LDVALENLNLKESGTGSYGSSSRSSKEPPPPPL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgagggtgtgagctgtgacgcgtgtttaaaagggaacttcagagggcgc
cggtacaagtgtttaatttgctacgactacgacctgtgcgcgtcgtgctacgagagcggc
gccaccacaacgagacacacgacagaacacgccatgcagtgtatattaaccagggtagat
tttgacctgtattacggcggtgaggcgttctcagtagagcagccccagagcttttcttgt
ccttactgtggtaaaatgggatacacagagacatccctacaggagcatgtcgcctcagag
catacagagacctccacagaggtgatctgtccaatatgtgccgcgttgccgggcggggac
cccaatcatgtgaccgacgactttgctgctcatctcacacttgaacacagagcaccgaga
gatttagatgagtccagcggcgtccggcacgtgcgtcggatgttccaccccggtcgcggg
ctgggcggtccaagggcacgcaggaccaacatgcactttactagcagctccaccgggggg
ctctcctcctcacagagctcctcgtactcacccagtaacagggaagccatggaccccata
gcagagctgttgtctcagctgtcgggcgtgcggcgctcggcgggcggccagctcaactcg
tcgggcccgtccgcatctcagctgcagcagttacagatgcagctgcagctggagcgccag
caggcccaggcggcccggcaacagctggagacggccaggaacaccacgcgacgctccaac
cccggcggcaacatcagcgccaccatccccccgcccagcgccgtcgccaactcggccggc
gtggccgagagcaaccccatggcctcccacagctcccagttcctgctcacacggttaaac
gagcccaagatgtcggaggcggagcggcaggcgctggagggcgagcgcgccgaccgcagc
ctgtttgttcaggagctgctgctgagcacgctgatgcgcgaggagagctcttcctcggac
gaggacgagcggcgagatttcgccagctttggggcaatgggctgtgtggatatcatgcct
ttagacgtggccctggagaatctcaacctcaaggagagcggtacaggcagttacggcagc
agctcgaggagctctaaggagcctccaccgcctcctctttga
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