Salvelinus namaycush (lake trout): 120026047
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Entry
120026047 CDS
T07522
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9 isoform X1
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120026047 (cdk9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120026047 (cdk9)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120026047 (cdk9)
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
120026047 (cdk9)
2.7.11.23 [RNA-polymerase]-subunit kinase
120026047 (cdk9)
Protein kinases [BR:
snh01001
]
Serine/threonine kinases: CMGC group
CDK family
120026047 (cdk9)
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
120026047 (cdk9)
Brd4/P-TEFb complex
120026047 (cdk9)
7SK RNP complex
120026047 (cdk9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
RIO1
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
120026047
NCBI-ProteinID:
XP_038826759
UniProt:
A0A8U0PN03
LinkDB
All DBs
Position
Sna31:18436417..18440392
Genome browser
AA seq
393 aa
AA seq
DB search
MQRDKTGNAAGAEKPDREAAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKHR
QTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRYKGSI
YLVFDFCEHDLAGLLSNANVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITR
DGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM
AEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPGVDKKYELYQKMELPKGQKRKVKDR
LKAYVKDPYALDLIDKLLVLDPAQRTDSDDALNHDFFWSDPMPSDLKNMLSTHNTSMFEY
LAPPRRRGHMPQQPANQNRNPATTSQTEFDRVF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagacaaaacaggaaacgccgccggggctgaaaagcctgaccgggaggccgcc
attatgtccaaatactacgacggagtcgaattccctttctgtgatgagttttctaaatat
gaaaagcttgccaagatcggccaagggacctttggggaggtgttcaaagccaaacacaga
cagactgggaagaaggtagcactgaagaaagtgttgatggagaatgagaaagaagggttt
cctatcactgctttgagagagatcaagattctgcagctcttgaaacatgagaacgttgtc
aacctcatagagatctgtcgaaccaaagccacccagttcaaccgctacaaaggaagcatc
tacctggtgtttgacttctgtgagcacgacctggcagggttgctaagcaacgccaatgtg
aaattcaccctggctgagatcaagaaggtgatgcagatgctgctgaatggactctactat
atccacagaaacaagatcttacacagagacatgaaggcggccaacgtgctcatcacccga
gacggcgtgctgaagctggcagactttgggctggcgcgagccttcagcctggccaaaaac
agccagggcaaccgctacaccaaccgtgtggtcacactctggtacaggcccccagagctg
ctgctaggcgagagagactacgggcctcccattgacctgtggggtgcaggctgcatcatg
gcggagatgtggacacgcagtcccatcatgcaaggcaacacagaacagcaccagctcaca
ctcatcagtcagctgtgtggctctatcacggcagaggtatggccaggcgtggacaagaag
tacgagctttaccagaagatggagctccctaagggccagaagaggaaagtgaaggaccgc
ctcaaagcctatgtcaaggacccgtacgccctggacctgattgacaagctcctagtctta
gacccggcgcagaggacggacagcgacgatgctctgaaccacgacttcttctggtcggac
cccatgccctcggacctgaagaacatgctctccacacacaacacgtccatgtttgagtac
ctggccccgccccgccggagaggtcacatgccccagcagccggccaatcagaacaggaac
ccggccacgacgagtcagacggagtttgaccgggtgttttga
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