Salvelinus namaycush (lake trout): 120026103
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Entry
120026103 CDS
T07522
Symbol
sec31a
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120026103 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120026103 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
snh02044
]
120026103 (sec31a)
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120026103 (sec31a)
Secretion system [BR:
snh02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
120026103 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_DCAF12
Beta-prop_HPS5
TPR_Sec16
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Prp18
Beta-prop_DCAF4
SAP_new25
Motif
Other DBs
NCBI-GeneID:
120026103
NCBI-ProteinID:
XP_038826837
UniProt:
A0A8U0PMD2
LinkDB
All DBs
Position
Sna31:complement(39673413..39696021)
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AA seq
1575 aa
AA seq
DB search
MKLKEINRTAIQSWSPAQHHPVYLAAGTSAQQLDASFSTSASLEIFELDLAEPSLDMKLR
GAYSSSHRYHKLAWGPHGMDAQGLPSGVLIAGGENGDVILYDPAKIIAGHSDVVIAQSNK
HSGPVRALDVNSFQTNLVASGGNESEIYIWDLNNFGSPMTPGPKTQPLEDISCVAWNRQV
QHILASASPSGRASIWDLRKNDLIIKVSDHSNRMHCSGLEWNPEVATQLVLASEDDRMPV
IQIWDLRFATSPLKVLENHTRGVLAIAWSLADPELLLSCGKDNRILCWNPNTAEVLYELP
TSTQWCFDIQWCPRNPAVLSAAAFDGHISIYSIMGGSSQAFSQTQADTISTSFGNMDPFG
MGQTLPPLQLSQAPPASTTITPLKKPPKWIRRPVGASFAFGGKLVSLENIKPNPQQPTAH
VVYISQVITETTFLERSAHLQATLAAGSFIDFCQEKMDSAQNEFEKTVWSFLKVNFESDA
RGKYLKLLGYKKEELAAKIAAALEGEPIQPEEPAPAPAPTSDPEPGVVPIPAPQLNTEPE
VLPPVPEAAAVEPTPEPPLEPALQPEPGPQPELAPPPSGDLSASDPMPVLQSEPVLTLDL
SAEPQLLAPVAPVALLPESDPTLAPTLAPPALAPPADLQQAPMFDPTASFTLQPPTEFNQ
VNSLPVSEFDQVDLEAVSDLTNLQPVPGFDPTSTIPSLQSAVQLDLAPPVPTLQPLADPG
LPPEDAFDLIAATNLQPAAELELTPAPEPEAENPFDLIAAANLQPAAELELTPAPEPEAE
NPFDLIAAANLQPAAELELTPAPEPEAEDPFDLITAANLQQAAELEVTGALEPLAAEVDL
TEALGAETITQEEMPVNEEIPLEEEAAPPVEASLPGETPVPEGIKLRVSQGVDGLITQAL
LTGDFQGAVDLCLHDNRMADSIILAIAGGAELLEKTQRKYFTKTHSKITKLISAVVMGDW
RDVLQTCELQNWKEALAAVMTYAQPGEFSSLCDLLGCRLEAVEDSTLQAQACLCYICAGN
VEKLVSCWTRAQDGHCPLSLQDLVEKVVVLRKAVEQTQESGPSAVGLLLGERMSQYASLL
ASQGSLTNAIAYLPQNTEQVEVQQLRDRLSRALGQQAPAAAPVAQPQLPSPQPTAAQPRQ
LFTPAQPSMVSQQPAPAPVPAAATAPQQYYQPVRSASTVTSWSNQTPTALPSVPPHLGPA
TTEPQVQPTPPMYGMPPSGSAAPPASSSAAYPPMYSHQYQPYPPASQYNRGTGGPAIYSP
LQYSAPPPPSFSSSSPQAPAPGFMPQYTQQPLYPPPSMGQPVSSAPPFSPPPLSSGASFQ
HGGPGSPASYMPPLPPTGSSEGYNPDTTCFMEGEGPQNGWNDPPTLNRVPKKKKVPENYT
PPSPITAPIFSPLGAGDPQQPPYMPPGQAQNQAPYQGMQQQTAPPPMNPGMLKTRGGSVE
GAPGAPTGDIIQPLQSIPAEKITMKPIPDEHLVLKNTFEGLIHKCLAAATDPQTKRKLDD
ANKRLEALYDKLREQTLSPAIIGGLHNMVQCIESRSYVESLNIHTHIVSSSNFSETSAFM
PVLKVVLTQANKLGV
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaagagatcaaccgcacggccatccagagctggagcccagcacagcaccat
cctgtgtacctggcagcaggtacatcagcccagcagctggatgcctcctttagtacctcc
gcctctctggagatctttgagctggacctggccgagccttctctggacatgaagctccgg
ggagcttactcctcctctcacagataccacaagctggcgtggggtccccacggcatggat
gcacagggtctcccgtctggagtgctcatcgcagggggagagaacggcgacgtcattctt
tacgacccggccaagatcattgctggacacagtgacgttgtcatcgctcagagtaacaaa
cacagcgggccagtcagagcccttgatgtcaactccttccagaccaacctggtggcttca
ggaggtaatgaatcagagatctacatctgggacctaaacaactttggctccccgatgaca
ccaggccctaaaactcagcctctagaggacatcagctgtgtggcgtggaacaggcaggtc
caacacatcctggcctcggccagccccagcggccgcgcctccatctgggacctccgcaag
aacgacctcatcatcaaagtcagcgaccacagcaacaggatgcattgctctgggctagag
tggaaccctgaggtggctactcagctggtgctggcctcggaggatgaccggatgccagtg
atccagatctgggacctgcgttttgccacctcccctctcaaagtcctggagaaccacaca
cggggtgtcctggccatcgcttggagcctggcggaccctgagctgctactgagctgcggg
aaagacaacagaatcctctgctggaaccccaacaccgccgaggtgctgtatgagctgcct
accagtacccagtggtgctttgacatccagtggtgtcccaggaacccagcggtgctgtcg
gctgcagccttcgacggacacatcagcatctactccatcatggggggcagcagccaggct
ttcagccagacacaggcagacacgatcagcacgtcatttggcaatatggatccatttggg
atgggacagaccctgccccccctgcagctttcccaggccccgcccgcctccaccaccatc
acccccctgaaaaagccccccaagtggatccgcaggcccgtgggggcctccttcgctttt
ggtggtaagctggtgtcgttggagaacatcaagcccaacccccagcagcctacggcccat
gtggtttacattagtcaggtgattacggagacgaccttcctggagcgctctgcccacctg
caggccacactggctgcaggcagcttcattgacttctgccaggagaagatggactctgcc
cagaacgagtttgagaagaccgtctggtctttcctgaaggtgaactttgagagtgacgct
cgcggaaaatacctgaagcttttgggatacaagaaggaggagctagcagcgaagattgca
gcagcattagagggagaacctattcagcccgaggagcccgcccctgctcctgcccccacc
tctgatcctgaaccaggggtagtgcccattcccgctccccagctcaacacggagcctgag
gtccttcctcccgtgcctgaggctgctgctgttgagcccacccccgaaccgccgcttgag
cccgccctccagcccgaacccggaccccagccagagcttgcccccccacccagcggtgac
ctttcagcttctgatcctatgcctgtcctccaatcggagcctgtccttactcttgacctc
agcgcagaaccccagcttcttgcccctgttgctcccgttgctctcctgccagagtctgac
cctactctggcccctactctggcccccccagctctggcccccccagctgacctgcagcaa
gcacccatgtttgatcccactgcctcctttaccctccagcctccaacagagttcaaccaa
gtgaactcactgcctgtatctgaatttgaccaggtggacttagaggctgtatccgacctc
accaacctgcagccagtacccggcttcgacccgacgtcaacaattcccagtctgcagtcg
gcagtccagctggacctggctcctcctgtccccaccttgcagcctctagcagaccctgga
ctcccgcctgaagacgcatttgacctcatcgctgctacaaatctccagccagcagcggaa
ctggaactcacacctgctccggaaccagaagcggaaaatccatttgacctcatcgctgct
gcaaatctccagccagcagcggaactggaactcacacctgctccggaaccagaagcggaa
aatccatttgacctcatcgctgctgcaaatctccagccagcagcggaactggaactcaca
cctgctccggaaccagaagcggaagatccatttgacctcatcactgctgcaaacctccag
caagcagcggaactggaagtgacaggagctctggaaccattggcagcagaagtagacctg
acagaggcccttggagctgagaccatcacccaggaagagatgccagtaaatgaagagatt
cctctggaggaggaagcggctccaccagtagaggccagcctgccaggggagaccccagtc
ccagagggcattaaactccgcgtcagtcaaggcgtggatggcctgatcacccaggccctg
ctgacgggggacttccagggcgcagtggacctctgtctccatgacaaccgcatggctgac
agcatcatcctggccatcgccggaggggcggagcttctggagaaaacacagaggaagtac
ttcaccaagactcacagcaagatcaccaagctgatcagtgcggtggtgatgggggactgg
cgtgacgtgctgcagacctgtgagctgcagaactggaaggaggctctggctgcagtcatg
acctacgctcagcccggggagttctcctctctgtgtgacctgctgggctgcagactggag
gctgtggaggacagcacgctgcaggctcaggcttgtctgtgttacatctgcgctggcaac
gtggagaaactggtgtcctgctggaccagagcacaggacggacactgccctctctctctg
caggacctggtcgagaaggtggtggtgctccgcaaggcagtagagcagacccaggagtct
ggtccctctgctgtggggcttctactgggagagaggatgagtcagtatgccagcctgctg
gcctcgcagggcagcctcaccaacgccatcgcatacctgccccagaacacagagcaggtt
gaggtgcagcagctgcgtgaccgtctcagcagagctctgggtcaacaggctcctgctgca
gccccggtagcccaaccccaactcccatcccctcagcccacagctgcccagcccaggcag
ctcttcacccctgcccagccttctatggtgtcccagcagcccgctccagcccctgtgcct
gccgctgccaccgcaccgcaacagtattaccagccggtgaggtctgcctctacagttacc
tcctggagtaaccaaactcccacagctctccccagtgtccctcctcatctaggccctgcc
accacagagccccaggttcagccgacaccccccatgtatgggatgcctccctctgggtca
gctgctcccccagcctcctcgtctgctgcgtacccccccatgtactcacatcagtaccag
ccctaccctccagccagccagtacaaccgtggcactggtggcccagctatctattcgcct
ctccagtactctgctcctcctcctccttccttctcttcctcctcaccccaagccccagct
ccaggcttcatgccccaatacacccaacaacccctttacccacctccttccatgggccag
cctgtgtcctccgctcctcctttctctcctcctccgctgtcatctggagcgtctttccaa
catggcggaccggggtcacccgcctcgtacatgccgccgctcccaccaaccggatcctca
gagggatataatccagacactacctgtttcatggaaggtgaaggccctcagaatggctgg
aacgacccgcctaccctgaacagagtgccaaagaagaagaaggttccagagaactacacg
cctccttcccccatcacggcccccatcttttctcccctcggtgccggggacccccagcag
cccccttatatgcctccaggccaggcccagaaccaggccccctaccagggcatgcagcag
cagacggcccccccacccatgaaccctggcatgctcaagacacgtggaggaagtgtggag
ggagcgcccggagccccgaccggagatatcatacagccgctgcagtccatccctgctgag
aagatcaccatgaagcccatccctgatgagcacctggtcctgaaaaacacctttgagggc
ctcatccacaagtgcttggctgctgccaccgatcctcaaaccaagaggaagctggatgac
gccaacaaacgccttgaggccctctacgacaagctacgagagcagaccctctccccagcc
atcatagggggcctgcacaacatggtgcagtgcatcgagtctcgatcctacgtggagagc
ctcaacatccacacacacatagtgagcagcagcaacttcagcgagacgtctgctttcatg
cctgtgctcaaggtggtgctgacacaagccaacaaactgggggtctga
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integrated database retrieval system
