Salvelinus namaycush (lake trout): 120026221
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Entry
120026221 CDS
T07522
Symbol
il1b
Name
(RefSeq) LOW QUALITY PROTEIN: interleukin-1 beta
KO
K04519
interleukin 1 beta
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04060
Cytokine-cytokine receptor interaction
snh04217
Necroptosis
snh04620
Toll-like receptor signaling pathway
snh04621
NOD-like receptor signaling pathway
snh04623
Cytosolic DNA-sensing pathway
snh04625
C-type lectin receptor signaling pathway
snh05132
Salmonella infection
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120026221 (il1b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120026221 (il1b)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120026221 (il1b)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120026221 (il1b)
04621 NOD-like receptor signaling pathway
120026221 (il1b)
04623 Cytosolic DNA-sensing pathway
120026221 (il1b)
04625 C-type lectin receptor signaling pathway
120026221 (il1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120026221 (il1b)
09171 Infectious disease: bacterial
05132 Salmonella infection
120026221 (il1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120026221 (il1b)
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120026221 (il1b)
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Interleukins
120026221 (il1b)
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Cytokines
120026221 (il1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL1
Motif
Other DBs
NCBI-GeneID:
120026221
NCBI-ProteinID:
XP_038826974
UniProt:
A0A8U0TRV3
LinkDB
All DBs
Position
31:complement(14603170..14605354)
Genome browser
AA seq
291 aa
AA seq
DB search
MQLKLADALPSSYSESMEFDAESCLPGAKGGPEMELHMGLTFDLEVLQQRQVGMRQVAHL
VMVLHRMKHTFQKSDSTHTPLGMVCTDEQXIIMDNLLEECVMERVQEPEGTVDKKAEGTF
KRLDSPQQCTLCDRYQKSLVHNPETMVLRAVTLRGGNDHQRVRFNLSMYNINMKNSHTIQ
AQPVALGIASSGFNLSCFKQTERTSPILQLERSSDDQLRTISAQGDTVRFLFYMTTKGIS
LTTFESAKYPGWFISTSLEQRQPVAMCQKEDLRKLTTFYVNNKGFFKGTTG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgaaattggccgatgctctgccgagctcttattcggagagtatggagtttgat
gcggaatcctgcctgcctggtgcgaagggtggaccagagatggagctgcacatgggcctg
acctttgacctggaggttctccagcagcgtcaggtaggcatgagacaggtggctcacctg
gtgatggtgctgcacaggatgaaacacacctttcagaagtccgactccacacacactccc
ctgggcatggtgtgcaccgacgagcagnncatcatcatggacaacctgttggaagagtgt
gtgatggagcgggtccaggagccagagggaacggtggataaaaaggctgaggggaccttc
aagcggctggacagcccccagcagtgcaccctgtgtgaccgttaccagaagagcctggtg
cacaaccctgaaaccatggtgctacgtgccgttacactgcggggcggcaacgaccaccag
agagtgaggttcaacctctccatgtataatattaatatgaagaactcccacactatccag
gcccagccggttgccttggggattgccagtagcggcttcaacttgtcctgcttcaagcag
acagaacgcacatctcccatcctacagttggagcggagttctgacgaccagttgaggacc
atcagcgctcagggagacacagttcgcttcctcttctacatgacaaccaaaggcatctcc
ctgaccaccttcgagtcggccaagtaccctggctggttcatcagcacctcactggagcaa
cgccagcccgtagcaatgtgtcagaaagaggacctcagaaagctcaccaccttctatgtc
aacaacaaagggttcttcaaaggtaccaccggctaa
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