Salvelinus namaycush (lake trout): 120026223
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Entry
120026223 CDS
T07522
Name
(RefSeq) scavenger receptor class B member 1-like isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03272
Virion - Hepatitis viruses
snh04145
Phagosome
snh04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120026223
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120026223
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
120026223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120026223
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120026223
Membrane trafficking [BR:
snh04131
]
Endocytosis
Phagocytosis
Scavenger receptors
120026223
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120026223
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Gene cluster
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
120026223
NCBI-ProteinID:
XP_038826975
UniProt:
A0A8U0PLJ4
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Position
31:13618875..13655685
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AA seq
513 aa
AA seq
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MNKSKLAIGLLVVGTLTVVFGTVIVFVGPIIIDNQIVKNLVIDPKNEMSYTMWKDVPVPF
FMTVYFFNVLNPTEVLAGEKPMVEQRGPYVYRKRIQKQNITFHPNHTVSYLEYRSYFFEP
SMSVGNESDVVTIPNMLVLGAAVMMEDLPFAVRLMISTTFKTFNEGPFLTKSVGKLMWGY
DSKLVDFLNKWLPGMLPSTGKFGLFAEFNNSNTGLFTIHTGKDDIRLIHKVDSWNGLTKL
TNWKTPQCNMINGTAGQMWPPFMTKESTLPFYSPDACRSLEMVYQREGIMEGIPLYRYVA
PKTLFANGSDYAPNEGFCPCRQSGLLNVSSCRSNSPVFISHPHFYNADPVLLDYVQGLQP
TEDQHGLFIDIHPETGVPLNVSIRLQLNLYMKKVSGITETGKISEVMMPMMWFEENGYID
GEILTTFHTNMVVLPMVMVYMQYCFIVLGLATILGVVLLYYRKKIIRCERTVIQDTNGSA
SPSEETPLLQHWVDTDSSLAQCCRALCFETGTL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctaagctagcaatcggacttttagtcgttggcactctgacggtagttttt
ggaacagttattgttttcgttggaccaatcattatcgacaaccaaatagtcaagaactta
gtgatagaccctaagaatgagatgtcctacaccatgtggaaggatgtccctgtccccttc
tttatgactgtctatttcttcaatgtcctgaaccctactgaagtcctggctggagagaaa
cccatggtggagcagagaggaccctacgtatacaggaagcgtattcagaagcagaacatc
acgttccatccaaaccacacagtgtcgtatcttgaatacaggagctacttctttgagccc
agcatgtcagtgggcaatgagtcggatgtggtcaccatccccaacatgcttgtgttgggt
gcagcagtgatgatggaggacttgccgttcgcagtgcgtctgatgatcagcaccaccttt
aagacctttaatgagggacctttcctcaccaagtctgtaggaaagctgatgtggggctac
gacagcaagctggtggacttcctcaataaatggctccctgggatgctgccctccactggc
aagtttggcctttttgctgagttcaacaactcaaacactggtttgttcacaatccacacc
ggcaaagatgacatcaggctgattcacaaagtggactcatggaatggcctgaccaagttg
accaattggaagactcctcagtgtaacatgatcaacggtacagcaggacaaatgtggcct
cccttcatgactaaagagtctacactgcccttctacagtcctgacgcctgcagatctttg
gagatggtgtaccagcgtgaggggataatggaggggattcctctgtatcgttacgtggct
cctaagactctgttcgctaatggctcagactacgctcctaacgagggattctgtccctgc
agacagtctggcctcctcaacgtcagcagctgcagatccaactccccagtgtttatctcc
cacccgcacttctacaatgctgaccctgtcctgctggactatgtacagggacttcagcct
actgaggaccaacatggactcttcatagacatccaccctgagactggtgtacctctgaat
gtgtctatccgtctgcagctcaacttgtacatgaagaaagtgtctgggatcacggaaacg
gggaagatctcagaggtgatgatgcccatgatgtggtttgaggagaatggttatatcgac
ggtgaaatcctgaccacgttccacactaacatggtggtattgccaatggtgatggtgtac
atgcagtactgtttcatagtcctgggcctggccaccatactgggggttgtactactatac
tacaggaagaagattataagatgtgagaggactgtcatacaggacaccaacgggagtgct
tcacccagcgaagaaacccctctactacagcactgggtggacacagatagcagtctagcc
cagtgctgcagggctctgtgttttgagactggaaccctatag
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