Salvelinus namaycush (lake trout): 120026267
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Entry
120026267 CDS
T07522
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120026267
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120026267
Transporters [BR:
snh02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
120026267
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Ortholog
Paralog
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
Pentapeptide_4
MFS_2
Pentapeptide_3
DUF6077
Pentapeptide
SNaCT12
Motif
Other DBs
NCBI-GeneID:
120026267
NCBI-ProteinID:
XP_038827021
UniProt:
A0A8U0PJG3
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Position
31:complement(31990978..32039779)
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AA seq
740 aa
AA seq
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MDESYNNRMSLVKGAKDIAKEAKRHAAKKVSKIVNRATDEYSSQRNYSQFQNEDKDNDDM
CYTQPDSNGHFPCSRTANDEDGEHYASDATEGHDDEDEIYEGEYQGVPAYTDRMPRDGQD
SLGQPVSDSLRDRKELELERQADEEELAQQYELIMQECGHGRFQWQLFFVLGMALMSDGV
EVFVVGFVLPSAETDMCVPNSGAGWLGSIVYLGMMVGAFFWGGLSDKVGRKQCLLIAMSV
NGFFSFLSSFVQGYGMFLFCRMFSGFGIGGAVPIVFPYFAEFLAREKRGEHLSWLCMFWM
IGGIYASAMAWLIIPHYGWSFSMGSAYQFHSWRVFVVVCVLPCVCAVVALTFMPESPRFL
LEMGKHDEAWMVLKQIHDTNMRARGEPEKVFTVNRIKLPKHLDELVEMQSDSSNPVGKVL
FRIRTELRGIWLTFMSCFNYPVKDNTIKLAFVWFTLSFGYYGLSVWFPDVIHHLQSDEYA
SRVKTHNNEHTEDFTFNFTLENQIHTNGVFVNDRFISMKLKSVTFIDSTFQNCYFDDVST
VGSLFKNCTFVEAFFYNTDIDDSKLVGSRVINSSFHHNKTGCQMTFDDDYSAYWVYLVNF
LGTLAVLPGNIVSALLMDKIARLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLS
ISAWNSLDVVTAELYPTDRRGTGFGFCNAMCKLAAVLGNLIFGSLVGITKTIPILLASAV
LVGGGLVGLRLPDTRGNVLM
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtcgtacaacaacaggatgtcgctggtgaagggcgccaaggacatcgccaaa
gaggccaaacgccacgccgccaagaaggtcagcaagatcgtgaaccgcgccacggacgag
tactcctcccaacgcaactacagccagttccagaacgaggacaaagacaatgacgacatg
tgctacacacagcctgacagcaacggccactttccctgcagccgcacagccaacgacgaa
gacggcgaacactacgccagtgacgccacagagggtcacgatgatgaagatgagatctac
gagggggagtaccagggggtgcctgcttacactgacaggatgcccagggatgggcaggat
tctctgggtcaacctgtctcagacagcctgagggaccgtaaggagctggagctggagagg
caggcggacgaggaggagctggcccagcagtatgagctgatcatgcaggagtgtggccat
ggcaggttccagtggcagttgttcttcgtgctgggcatggcgctgatgtcagacggtgtt
gaggtgtttgtggtggggttcgtcctgcccagcgccgagactgacatgtgtgttcccaac
tctggagctgggtggctaggtagcatagtgtacctggggatgatggtgggggcgttcttc
tgggggggtctgtcagacaaggtgggccgtaaacagtgcctgctcatcgctatgtctgtc
aacggcttcttctccttcctctcctcctttgtccaggggtacggcatgttcctcttctgc
cgcatgttttccggcttcgggattggtggggcggtccccatcgtgttcccctactttgcg
gagttccttgcgagggagaagagaggagagcacctgagctggctctgcatgttctggatg
ataggagggatctatgcctcggcaatggcctggctcatcataccacactatggatggagt
ttcagtatgggctccgcctaccagttccatagttggagagtgtttgtggtggtgtgtgtt
ctaccctgtgtgtgtgctgtcgtagcactcaccttcatgcccgagagcccacgattcctc
ctagagatgggtaaacatgacgaggcatggatggtgctgaaacagatccatgacaccaac
atgagggcccgtggagaaccagagaaagtcttcaccgtgaacagaataaagctccctaag
catctggatgaattggtagagatgcagtcagactcatccaaccctgttggcaaagtcctc
ttcaggatcaggactgaactcagagggatctggttaacattcatgagctgtttcaactac
ccagtgaaagacaacaccatcaaactggcctttgtgtggttcacactgtcttttgggtac
tatggcctatcagtgtggttccctgatgtcatccatcacctgcagtctgatgagtatgcc
tctagagtgaagactcacaacaacgaacatacagaagacttcacctttaacttcaccctg
gagaaccagatacacaccaacggagtattcgtcaacgacaggttcatcagtatgaagttg
aagtccgtcacctttatagactctacgtttcagaactgctactttgacgacgtgtcaaca
gtgggctcattattcaagaactgcaccttcgtagaagccttcttttataacacagatatt
gacgattctaagctggtggggtcgagggtgatcaacagttcgttccaccacaacaagacg
ggctgtcagatgacctttgatgatgactacagcgcctactgggtctacttggtcaacttc
ctggggacgcttgccgtgttgcccggcaacatagtctccgcccttctcatggacaagata
gcgcgcctgagcatgctggggggctccatggtgctgtcaggcatcagttgtttcttcctg
tggtttgggacaagtgagtctatgatgatcttcatgctgtgtctctataacggcctcagt
atatcagcctggaactccctggacgttgttactgctgagctctacccgactgataggagg
ggtacaggttttgggttctgtaatgccatgtgtaagctggcagcggtgttggggaacctg
atcttcggctctctggttggcatcacaaagaccatccccatcctgctggcgtcggctgta
ctagtgggaggaggcctggtgggactacgactgcctgacacacgcggcaacgtcttgatg
tag
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