Salvelinus namaycush (lake trout): 120026415
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Entry
120026415 CDS
T07522
Name
(RefSeq) POU domain, class 5, transcription factor 1-like
KO
K09367
POU domain transcription factor, class 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120026415
03021 Transcription machinery [BR:
snh03021
]
120026415
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120026415
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120026415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Stevor
Motif
Other DBs
NCBI-GeneID:
120026415
NCBI-ProteinID:
XP_038827202
UniProt:
A0A8U0PLK4
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All DBs
Position
Sna31:complement(21388542..21392700)
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AA seq
464 aa
AA seq
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MSERSQSPISDCNSRADDFSRPMYAQALGQEAFGGTSLQIPHGVLQHHSLLFNKTAYNGL
PPTPQTFFQFPPSGGDYRASDLQAGDFCQPKHWYPIAAPEYTGQVPRVAVTTQATNLSPP
IAEAREQIKMSDIKIEKDVNDEYEVKSQQYPTPSSAVAHGVYYSTPWNPSFWPGLPHITA
ASSNIQNLNSIPSTSSSTSPSLSPSPPSNGLPGITFNGSASQGAQAQTQSNGSSSGGCSD
SEEEENPSTEELEQFAKELKHTRITLGFTQADVGMALGNLYGKMFSQTTICRFEALQLSF
KNMCKLKPLLRRWLNEAETSDNPQDMYKIERVFVDTRKRKRRTSLEGSVRTALESYFVKC
PKPNTQEITHIADDLCLERDVVRVWFCNRRQKGKRLALPFDEECEGQYYEQSPPPPHMTH
SPLPGQGYHLSSHTGAPTFYMPPLQRPDVFKQALHPGLVGHLTS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcgatctcagagccctatttcggattgcaacagccgggcggatgacttcagc
cgacccatgtacgcccaggccttgggtcaagaggcgtttggcggcacgtcgctccagatc
cctcacggcgttctacagcaccacagtcttctattcaacaagactgcatacaatgggttg
cctccaacacctcaaaccttttttcaattcccaccgtccggtggtgactatagggcctcc
gatttacaagccggtgacttttgccaacccaaacactggtatcccatcgccgctcccgaa
tacaccggccaagtaccgagggttgcagtgactacgcaggccacaaacctgagcccaccc
attgccgaagccagggaacaaatcaaaatgtctgatataaagattgagaaggatgtcaat
gacgagtatgaggtaaagagtcaacagtatccaactccgtcgtccgctgtggctcatggg
gtttactactcgaccccatggaacccctcgttttggcccggccttccccacatcactgct
gcgagttccaatattcaaaacctcaactccataccctcaacatcgtcttcaacatcccca
tcgctctcgccgtcaccccccagcaatgggttacccgggatcacgttcaacgggagcgca
agccaaggtgctcaagcgcaaacccagagcaatggatcctccagcggtgggtgcagcgac
tccgaggaagaggagaacccttcaactgaggagctggaacagttcgccaaggagctgaag
cacacgcgtataacactgggtttcacacaagcagatgtaggaatggctctaggcaatctt
tatggcaagatgttcagccagactacaatctgtcgtttcgaagccctccagctcagcttc
aagaatatgtgcaagctgaagcccctgcttcggagatggctgaatgaggctgagacctct
gacaacccccaggatatgtacaagatcgagcgggtgtttgtggacaccaggaagaggaag
cggcggaccagtctggagggttcggtgcgcacggctctagagtcctactttgtcaagtgc
cccaagcccaacacccaggagatcacacacattgcagacgacctgtgtctggagagagat
gtggtgcgtgtgtggttctgtaaccgcagacagaagggcaagcgcctggccctccctttc
gatgaggagtgtgaaggacagtactacgagcagagcccacctcccccgcacatgacccac
tcccccctccctgggcaggggtaccacctatccagccacaccggggcccccactttctac
atgccccccctccagaggccagatgtctttaagcaggccctgcaccctggactggtgggt
cacctgaccagctaa
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