Salvelinus namaycush (lake trout): 120026460
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Entry
120026460 CDS
T07522
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
120026460 (clip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120026460 (clip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120026460 (clip1b)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
120026460 (clip1b)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
120026460 (clip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
120026460
NCBI-ProteinID:
XP_038827251
UniProt:
A0A8U0TTH3
LinkDB
All DBs
Position
Sna31:complement(39139757..39175071)
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AA seq
855 aa
AA seq
DB search
MSTGKPSGIKPPSKISRPTGLPTRTSPSSTAPKPVPPEKSPTQDGEMDYQVGEKVWVNGN
KPGYVHFLGGTQFAPGQWAGIVLDEAIGKNDGSVAGVQYFQCEDGRGIFTRPSKLTKTAM
PEMEANCGQPNPGETGANSPTAAAAGAANTTGNSTKTPLSRTMTGSGSVSNLSETDSAKK
TRRELRLGDRVLVGGNKSGVVRFMGETEFAKGEWCGVELDEPLGKNDGAVAGSRYFQCLP
RYGLFAPVHKVSRIGFPSTLAKAKASSRRHSTMKRSPSASSLSSLSSVTSSVSGKPSRSG
LLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDMERGEVAKATSHAGEVQQELSL
LTKVQGQYAMEMEAKLDQLRELVETADRDKVELLNQLEEEKRKVEDLQFTVEEACITKGD
LEVATVSERSRIMELEREVVELQLRLRSSQQTEGAVSLSPEELSDLKARAQSQEKKISEI
SVELDNRQEQLRSVEEDKISLEQQLISLRQKLDAAEKDNTTMAQTMHELENRVAQAGKER
EAQREENQCKEKELQDRLTQAAESSERTTHSVEQLTNEKTALEAQLEALKRQNSKYQEEL
SLSQERSSSENQRIGNLCKEIEELKLNSHKSQYQQDMKDRETLSNQETGEERNFQKTDKD
KELETLRNEIVVLQGENAIAKTLQSAVEALERDKAQLQGCVTSLEQRLMGQQASEGGDSG
MPSSGDAVLDQLREEKEFAEGQINFLNSVIVDLQRKNEELKVKLKKMVLAEFNGGTDGLE
ECGSKKDKKAPPRLFCDICDCFDLHDTEDCPTQAQSPDSVPHSSFKGKPADQRPYCDICE
AFGHSTESCQDDQTF
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggcaagcccagcggaatcaagcctcccagcaagataagcaggccaactgga
ttaccaacacgcacctccccttcctctactgctccaaagcctgtacctcctgagaagtct
cccacccaggatggagaaatggactaccaggtgggggagaaggtgtgggtcaacggcaac
aagccaggatatgtccacttcctggggggcacgcagtttgccccaggccagtgggccggc
atcgtcctggatgaggccatcggaaagaatgacgggtcggtggcgggggtccagtacttc
cagtgcgaggacggcagaggaatattcacacgcccctccaagctgaccaagacggctatg
ccagagatggaggccaactgtgggcagcctaaccctggcgagacaggggcaaactcccct
accgctgctgctgctggggctgctaataccactggtaacagcaccaagacaccgctgagc
agaaccatgacgggcagtgggtcagtgtccaacctctctgagacagactcagccaagaag
accagaagagaattgagactgggagaccgcgtgctggtgggaggtaataagtcgggggtg
gtgaggttcatgggggagacagagtttgccaagggggagtggtgtggagtggagctggac
gaaccacttgggaagaatgatggagccgtggctggatccaggtatttccagtgcctgccg
cggtacggcctgtttgcgccggtccacaaggtgagtcgtatcggcttccccagcaccctg
gctaaagccaaggcctcctcacggagacactccaccatgaagaggagtcctagcgcctcc
tccttgagctccctgagctctgtcacctcctctgttagtgggaaacccagccgctctggc
ctgctgaccgagacctcttcgcggtatgctcgtaagatctctggcactacagcgctacag
gaagccctgaaggagaagcagcagcacatcgagcagctattggccgagagggacatggaa
cgcggggaggtcgccaaggcaaccagccatgctggggaggtgcagcaggaactgtcactg
ctcacgaaggttcaggggcagtatgctatggagatggaggctaagctagatcaactgcgt
gaactggtggagacagcagacagagacaaggtggagcttctgaaccaactggaggaagag
aagaggaaagtggaagacctgcagttcactgtggaggaagcttgcatcactaaaggtgac
ctagaggtggccacagtgtctgagcggtctaggatcatggagctggagagagaggtcgtg
gagctgcagttgagactacggtcctcccagcagacagagggtgctgtgtcgctgtcacca
gaggagctcagcgacctcaaggcccgggcccagtcccaggagaagaagatcagcgaaatt
agtgtggagctggacaacaggcaggaacagcttcgctctgtggaggaggacaaaatctcc
ctggaacagcagctaatcagcctgagacagaaactggacgctgcagagaaagacaacacg
acgatggcacaaaccatgcatgagctggagaacagagtggcgcaggcgggaaaagagagg
gaggcacagagagaagagaaccaatgcaaagagaaagagcttcaggatagactgacgcag
gctgctgagtcgtcagagaggaccacccactccgtcgagcagctgaccaatgagaagaca
gcgctggaggctcagctcgaggcgctgaaacgacagaattccaaataccaggaagaactc
agtctctcgcaggagcggagcagctcggaaaaccagcgcatcggaaatctgtgcaaggaa
attgaggaactgaagctgaacagtcataagtctcagtaccagcaagacatgaaagacagg
gaaactctatccaaccaggagacaggggaggagagaaacttccagaagacagataaggac
aaggagctggagactctgaggaatgagattgtggtgctgcaaggtgagaacgccatagcc
aagacgctgcagtctgccgttgaggcgctggagagagacaaggcccaactacagggatgt
gtcaccagcctggagcagaggctcatgggacagcaggcctccgagggaggggacagtgga
atgccttcctcaggtgacgcagttctggaccagctgagagaagagaaggagtttgcagag
ggacagattaacttcctgaacagtgtgatcgtggacctgcagaggaagaacgaggagttg
aaggtgaagctgaagaagatggttctggctgagttcaacggcggcactgacggtttggaa
gagtgtggatctaagaaggacaagaaggctcctcctcgtctgttctgtgatatctgtgac
tgtttcgacctccatgacaccgaagattgtccgacccaggcccagagccctgactcagtg
ccccactcttccttcaagggcaagccagccgaccagcggccgtactgcgacatctgtgag
gcctttggtcactccacagagtcctgccaagatgaccagaccttctag
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