Salvelinus namaycush (lake trout): 120026470
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Entry
120026470 CDS
T07522
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120026470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120026470
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120026470
mRNA degradation factors
5'-3' decay
Lsm complex
120026470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
120026470
NCBI-ProteinID:
XP_038827267
UniProt:
A0A8U0PLV6
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All DBs
Position
Sna31:complement(14266828..14271834)
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AA seq
147 aa
AA seq
DB search
MRFTSRPKMNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLQQTVERIHV
GKRYGDIPRGIFIVRGENVVLLGEIDLEKESDTSLQQVCIEDILEEQRLQQQSRQEAEKT
KHLALKERGLVMPRPDIMDEYGVQHQY
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgagatttacaagtcgaccaaaaatgaactacatgccaggaacagccagcctcatcgag
gatatcgataaaaaacatctcgtcctgctccgagatggaagaacgttgatcggctttctc
agaagcattgatcagtttgccaacctggtgctgcaacagacggtggagaggatccacgtg
ggcaagaggtatggagacatccctcgaggaatctttatcgtcaggggagagaacgtagtc
ctcctgggggagatcgacctggagaaggagagtgacaccagtctgcagcaggtgtgtatt
gaggacatcctggaggagcagcgactgcagcagcagagcaggcaggaggcagagaagacc
aaacacctggccctgaaggagagaggcctggtcatgcccagaccggacatcatggacgaa
tatggagtacagcaccaatactga
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