Salvelinus namaycush (lake trout): 120026783
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Entry
120026783 CDS
T07522
Symbol
grin2da
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120026783 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120026783 (grin2da)
04082 Neuroactive ligand signaling
120026783 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120026783 (grin2da)
Ion channels [BR:
snh04040
]
Ligand-gated channels
Glutamate (ionotropic)
120026783 (grin2da)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
120026783
NCBI-ProteinID:
XP_038827428
UniProt:
A0A8U0PLP5
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Position
32:complement(7555820..7598374)
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AA seq
1927 aa
AA seq
DB search
MNQLLGSLFACEPPPPLRPPNCAPPPPSPMAAKPALSLLLARERDLGVVNIAVVHSGSSL
LPETAAAGGTGATGGPGGPQGRGASSSLATVSASAPLASASAALVGDSVMTQYGPANVIY
LTVNESSPASLLLQLCELLATTPLQGLVFEEERPPPHNQAPLAPMMEFVSAQTGVPVVAV
GGGAAVVLLPQESGSIYLQFTCSTAMQLDVIFEVLEEFDWTSFSVVATRHHGYEDFLAMV
EGLTDGSFIGWEKKGVVMLNVTDDPGGTRTRRLLKENEAQVRLLYCSQEEAALIFKAAWA
SGQAGHSHMWFAVGPALSGLGLEGLPKALFAVRPQGWRDEPRRRIAKGVSVLTHGAMALR
KEYGWARGPHYFAGNCQTDGNQTQRVPDRIRFFSNITLSGRDYSFNSDGYLSNPVLDVIS
YSEGKGWEEVGTWQNGVLDLIIQPFSRYGSFLKPLDDTQHLKVVTLEERPFVIVEPADPG
TNSCIRDSVPCRLPLNTTNVPVDEKSSKHCCKGFCIDVLKRLAKIVGFSYDLYLVTNGRH
GKRGSDGQWNGMVGEVVYKRADMAIGSLTINKERSEVVDFSVPFVETGISVMVSRSNGTV
SPSAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSAKKTGGSKFTIGKS
IWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSG
LSDKKFQQPTEQYPPLRFGTVPNGSTEENIRSNYANMHNFMIRNNQKGVEEAIDNLKTGK
LDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNTRWKRPVDLALLQLVG
DDEIDMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFSWEHLVYWK
IRQCLGHSGGMDFLLALSRGMYSCCKFKDETISGGLKNTLPLYHSVPTMPPPPQSHISAA
VTCNTTLAMVQQQQMHQQQQQQQQQAYSMLPAASPPTTGHSAMAIGPSNSPLMEGPMPCS
TFLPRHDRRLAVVDRWNRPKPSTDKPIGGSGGIPDMAQFQQGLPPHWAGGAGGGDGSLDE
YKRYYGPIDPEGLGANADPQTGGSQTPKINQRGTKSSGMPRLPSKGPPPWHFMSKPPLPL
PSSPHRPLFWRRGSLPKRKGSGGPLYENILPLGRRGGGRYGARDGGGRRSRCPPPLPLPV
PVSSPAHTTPTTPSHSVLYTSSSCSSTSSSSSSSSSSVSLSRSNSTSSSITSYTSSQSFK
YRAGSRDVDDIYDSDELTEESSLLLVRRKGKSRRMSSRSLPCSPPPPPVPPRKPHLQYER
ERAGSQLAQLQEWWASWGERERRRGTGTRAEGKEEKRHHKESERERKRRKKGRKKKKREE
KERERERKRRKVKKKRKKEEKVKRRDRGKRSEHEGDGEQRGHLKAITQEAYSSYPAPRRD
SMRKKSESSIRSYGWDIPRDEERREREDKERDDGDDTRGKERNRSPHSRHRHADRPSSSS
KQYQSSSKPSTSVKFWGAGNPSSETPSSAFLPLIPFSSRRRSKGSDREALGKEGEKRPLL
GRNERVEVHSKEGLSFHEWDSEDEDDDSKAQRRKVEQETRHERRRRTASESERERDKVVG
IYSDDDGSSGEFGKFERYWDGHEGRAVGGIGGGGWFFGTYPAREKAGSINSRDDSLLRHG
EGWRGAGEGGWGSGEAWGSRRIGGTQWPPPPLTPPAPQRYWSVDKLPVKEEKKGKRKVKG
RGDVACNCQSALEHQHAHSKWAKVSSRSQEELFLHCQRFGSSANSKRHYSKPDRTQNQPI
SGSQSNLSIQRTQRTDRIRQSSTSQTLIPSLPPPTLPALPAPPSASHPIHVPLPTSSSSV
SSPSVVSSTPGAPQPSSMASASAKLLYQRLRSVPQPQRLQSPHLPLKAKSLCSRRGSAHF
SSVESEV
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagctcctggggtccctcttcgcctgtgaaccgccgccaccactccgcccacca
aactgcgccccccctcctccctcccccatggcggccaagcctgccctctccctcctgttg
gccagagagagggacttgggcgtagtcaacatcgctgtggtccactcgggctcctccctg
ctcccggagacggctgctgctgggggaacgggcgcaacgggcgggccgggggggcctcag
ggaaggggggcctcgtcgtcattggctacggtgtcggcatccgcgccgctggcgtctgca
tcggcggctctggtgggtgacagcgtgatgacgcagtatggcccggccaacgtgatctac
ctgacggtgaacgagagcagcccggcgagccttcttctgcagctgtgtgagctgctggcc
accacgccgctccagggcctggtgttcgaggaggagaggcccccgccacacaaccaggct
cccctggcccccatgatggagtttgtctcggcccagaccggagtgcccgttgtggccgtg
ggaggaggggccgctgttgtcctcctcccccaggagagcggctccatctacctccagttc
acctgctccacagccatgcagctggacgtgatcttcgaggtgctggaggagttcgactgg
acctccttttccgtggtggctacgcgtcaccacggctacgaggacttcctggccatggtg
gagggcctgacggacggatccttcatcggctgggagaagaagggagtggtcatgctcaac
gtcaccgacgacccaggagggacgcgcacacgcaggctgctcaaggagaacgaggcgcag
gtgcgtctcctctactgctcccaggaggaggccgcactgatcttcaaggcggcctgggcc
tcgggtcaggccggacactcccacatgtggttcgccgtggggccagccctgtccggcctt
ggcctggagggcctccccaaggccctgttcgcagtgcggccgcagggctggagggacgag
ccccgcaggaggatcgccaaaggggtgtctgtgctgacccacggagccatggctttgagg
aaggagtacggctgggcccgagggccacactacttcgcaggcaactgccagacagatggc
aaccagacacagagggtgccagacaggatcaggtttttcagtaacattacgctgagtggc
cgggactactcgttcaacagcgatggctacctgtctaatccagtgctggacgtgatttcc
tactccgaggggaaaggctgggaggaggttggcacgtggcagaacggtgttctggatctc
attatccagcccttttcacgctacggctccttcctcaagccgctggatgacacccagcac
ctcaaggtggtcaccctggaggagaggccctttgtcattgtggagccagctgacccaggc
accaactcctgcatccgggactcggtgccctgcagactaccgctcaacaccaccaatgtg
ccggtggatgagaaatcatcgaagcactgctgcaaaggcttctgcattgacgtcctcaag
cgattggccaaaatagtgggcttctcctatgacctctacctggtgaccaatggcagacac
gggaagagggggagtgatgggcagtggaatggcatggtcggggaggtggtttataaacgg
gccgacatggccattggctccctgaccatcaacaaggagaggtcagaggtcgtggacttc
tccgtccccttcgtggagacgggcatcagcgtcatggtctcccgtagcaacggcaccgtc
tcgccgtcggccttccttgagccgtacagcccagctgtgtgggtgatgatgttcgtcatg
tgcctgtccgtggtcgccgtcacagtctttattttcgagttcttcagccctgttggctac
aaccgcagcctgcagagtgcaaagaagacagggggctctaaattcaccatagggaagtct
atctggctgctgtgggctctggtcttcaataactcagtgcctgtggagaaccccagagga
accactagtaagatcatggtgctggtgtgggccttcttcgctgtcatcttcctggcctcc
tacacggccaacctggcagccttcatgatccaggaggagtacatcgacactgtgtctggc
ctcagcgacaagaagttccagcagcccactgagcagtaccccccgctacgatttggcacc
gtccccaacgggagcacggaggagaacatccgcagcaactacgccaacatgcacaacttc
atgatccgcaacaaccagaagggcgtggaggaggccatcgacaacctcaagactggcaaa
ctagatgccttcatctatgatgcggctgtgctaaactacatggcgcggaaggacgagggc
tgtaaggtgatgaccattggctcgggcaaggtgttcgccaccacgggttatggcatcgcc
ctgcataagaacacccgctggaaacgccccgtggacttggccctactgcagctggtggga
gacgacgagatcgacatgcttgagcgcctgtggctctctgggatctgtcacaacgacaag
attgaggtgatgagctccaagttggacatcgacaacatggcgggcgtcttctacatgctg
ctggtggccatggggctcagtctgctggtgttctcctgggagcacctggtgtactggaag
atcaggcaatgcctgggccactccgggggcatggacttcctactggccctcagcaggggt
atgtacagttgctgcaagtttaaagatgaaaccatctctggaggcctaaaaaacacactt
cccctatatcatagtgttcccacaatgccgcctccaccccaatcccacatctcagcggct
gtaacctgtaacactacccttgctatggtgcagcagcagcagatgcatcagcagcagcag
cagcagcaacagcaagcatacagcatgcttcctgctgcatctcctccgactactgggcac
tctgcaatggccattgggccatcaaacagtccccttatggagggtcctatgccgtgctcc
acttttctgcctcgtcatgaccgcagattggctgtggtagaccgctggaaccgtcccaag
cccagcacggacaaacctattggtggcagcggtgggatcccagacatggcacagtttcaa
cagggcttgccccctcattgggctgggggagccggtggaggggacgggagtctggatgaa
tacaagcgatactatggcccgatcgatccagagggcttaggggcaaatgctgacccacaa
acaggtggctctcaaacccccaaaattaaccagaggggaacaaagtcctcaggaatgcca
cggctaccttctaaaggaccgcccccttggcacttcatgtccaagccccctctaccgctc
ccctcatccccacatcggccgctattttggagaagaggcagcctccctaaaagaaagggc
tccggggggcctctgtatgagaacatcctccccctggggagaagagggggagggcggtac
ggcgcaagggatggaggtggcaggcgaagccgttgccctcccccactccctttgcctgtc
cctgtctcgtcccctgcccacactactcctaccactccttctcactccgtcctctacacc
tcgagctcctgctcctccacctcatccagttcatcctcatcctcatcctccgtctccctc
tcccgctccaactcaacctcatcctccatcacctcatacacatcgtcccagagttttaag
tacagggctggcagtagagatgtcgatgacatctatgactctgatgagctgacagaggag
tctagcctcctgctagtacggagaaagggcaaatcccgacgcatgtcctctcgctcactg
ccttgcagtccaccccctccgcctgtgccaccccgcaagcctcatctacagtatgagaga
gagagggcagggagccagctagcccagctgcaggagtggtgggcctcctggggcgagaga
gaaagacgtagaggaacaggaaccagggctgaggggaaggaggagaaacggcatcacaaa
gagagcgaaagggagagaaagaggaggaagaaagggcggaagaaaaaaaagagagaggag
aaggagagagagcgggagcgcaagcggcgtaaagtgaagaagaagaggaagaaagaggag
aaggtgaagagaagagaccggggcaagcgatcagagcacgagggagatggtgagcagaga
gggcacctcaaagcgataacgcaagaggcctactcctcctaccctgctccgaggcgtgac
tccatgcggaaaaagagtgaaagttctatcagaagttacggatgggatattccaagggat
gaagagaggagagagagagaggataaggaaagagatgatggagacgacactagaggcaag
gaaaggaacagaagtcctcactctcgccacaggcatgcagataggccttccagttccagc
aagcagtaccagagctccagtaaaccctcaacctctgtcaaattctggggagcaggaaac
ccatcctcagagactccttcatctgcatttctaccactgatccctttctcatccaggcgc
aggagtaagggttcagatagagaggccctagggaaagaaggggagaagcgccccctgttg
ggcaggaacgaaagagtggaggttcactccaaagaaggtctgtcgtttcatgagtgggat
tccgaagatgaggatgacgattccaaggcgcaaaggagaaaagtggagcaagagacgaga
cacgaaagaagaagaaggaccgcatcagagtccgaaagggaacgcgataaggtggtgggc
atctactccgacgacgacggctcctcgggagaattcggaaagttcgaaaggtactgggat
ggtcatgagggtagggcggttgggggcataggagggggaggttggtttttcggcacttat
cccgccagagaaaaagctggcagcataaacagtagggatgactcgttactgaggcatggg
gagggatggaggggagcaggggaaggtggctggggatcaggtgaagcctggggttcaagg
aggataggtggtacacagtggcctccacctccattgacaccaccagctcctcaaagatac
tggtccgtggacaagcttcccgtgaaggaggagaagaaagggaaaaggaaggtcaaaggg
cgcggtgatgtggcttgcaactgccaatctgccctcgagcatcaacacgctcactctaaa
tgggccaaggtgagctctcgtagccaggaggagctatttctacactgtcaacgtttcggg
agcagcgccaattccaaacggcattactccaaacccgaccggacccagaatcaacccata
tcgggaagccagtccaacctcagcatccagcgaacacagcggacggaccgcattcggcag
tcctctacatcgcaaaccctcatcccctccctccctccaccaacactcccagcccttcct
gcccctccttctgcatcccatcccatccacgtccctcttcccacctcgtcctcttcggtc
tcatctccctctgtagtatcctccaccccaggcgccccccagccgtcttctatggcttct
gctagtgccaaactcctgtaccagagactgcgttcagtgccccagccccaaaggttacag
tcacctcacctgcccctcaaggcaaagagcctctgctcacggagggggtctgcacacttc
tccagtgtggagagtgaggtgtga
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