Salvelinus namaycush (lake trout): 120026839
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Entry
120026839 CDS
T07522
Symbol
si:ch211-57n23.4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 3
KO
K22654
immunoglobulin superfamily DCC subclass member 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120026839 (si:ch211-57n23.4)
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
PUNC
120026839 (si:ch211-57n23.4)
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Adeno_E3_CR2
Sp38
Pur_ac_phosph_N
Syndecan
Adeno_E3
Motif
Other DBs
NCBI-GeneID:
120026839
NCBI-ProteinID:
XP_038827477
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Position
Sna32:complement(13092078..13113532)
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AA seq
717 aa
AA seq
DB search
MGLSRVLSEDVCGAKELAILLEPSDVIAVRDRPLMLDCRVEGEGPISITWRKNGVPVVVG
ERVQVLPNGTLFIQSFQKRLDRVGSETDVGDYDCAAQNRFGMLVSRKARVQLASLPKFHI
HPESMSVDDGGVARFKCQVNSVPEANITWERDRTPLSTTDNRYTLLPMGILQVTGVRRID
AGVYRCMASNIANTRFSHEAVLNVTGEASRIYKEPVILSGPQNLTITVHQTAILECIATG
NPRPIVSWSRLDGRSIGVEGIQVLGTGNLMISDVSLQHSGVYVCAANRPGTRMRRTALGR
LVVQAPPEFMQWPQSVSKPAGGSAVFTCVAQGVPEPHLIWLKNGKILMPGDNVKLTNNNS
TLAVTRITSEDEAIYQCIAENMAGTNQASARLAVSLAKDLPDSPQGLTATALSPSALQLA
WIQPPVEITDGIIGYVLHIRKISEPDSRELQEAVSKTTFQHDFTNLEPATTYSIYLKAYS
PLGASQQSSTVVATTLGGVPSPPTFFTKVVNSTAVQVLWELPSKPGKAEGFRLTYRRVPH
ADFQGPVQFPCHVNAHTISRLETGAVYEVKLVAYNGNGESDCSKRLVSLAEEGTSSKTSG
ENQCTCRQESEGSMGGIVVGIHIGMACIIFCVLFLMFGYRHSKGTQYSWSVPRGEDRGQL
GQNGIPKEGVTRPVEVTLELVPQSHDSTFHGGAPVRPAQCQVLIEQHSFGLPGMGTG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggactttctagggtgttgtcggaagatgtatgtggtgccaaggagctggcgatccta
ttggagcccagtgacgtcatcgctgtgcgggatcggccgctgatgctggactgccgggta
gagggcgagggtcccatctcgatcacgtggcgcaagaacggggtgcccgtagttgtgggg
gagcgtgtacaggtgctgcccaatgggaccctcttcatccagagcttccagaaacgacta
gacagagtcggaagtgagacggatgttggagattacgactgcgccgctcagaaccgcttt
ggcatgctggtcagccgcaaggcccgtgttcagctggcatccctccctaagttccacata
cacccagagtccatgtcagtggacgatggcggtgtggctcgcttcaagtgccaggtcaat
agtgtacccgaggcaaacatcacttgggaaagggacagaaccccactcagtactaccgac
aacaggtacactctcctgccaatgggtatcctccaggtgactggtgtgaggcggattgac
gccggggtgtaccgttgtatggcctccaacatcgccaacacacgtttcagccatgaggct
gtgctcaatgtaaccggtgaggcttccaggatctacaaggagccagttatcctctctggg
ccccagaacctgaccatcaccgtccaccagacagccattttggagtgcattgccacaggg
aacccccggcccattgtgtcctggagcaggctggatgggcgctccatcggggtggagggc
atccaggtgttgggcactggaaacctgatgatctcggacgtgtcgctgcagcactcgggg
gtgtacgtgtgcgccgccaaccgccccgggaccaggatgaggcgtactgcactgggaaga
ctggtggtgcaagctccccctgagttcatgcagtggccgcagtctgtctcaaaaccagcg
ggaggcagtgctgtgttcacctgtgtggcccagggcgtccccgagcctcacctcatctgg
ctgaagaatggcaagatcctgatgcccggtgacaatgtcaagctcaccaacaacaacagc
accctggccgtgacgcgcatcacctcggaggacgaggccatctaccagtgcatcgctgag
aacatggccggcaccaaccaggctagcgcccgtctggccgtgtccctggctaaggatctg
cccgactccccccagggcctcacggccaccgccctctcccccagcgccctgcagctcgct
tggatccagccgcccgtagagatcaccgacggcatcatcggctatgtgctccacatccgc
aagatcagcgagccagacagtagagagctgcaggaggcagtcagtaaaactaccttccag
catgacttcaccaacctggagccagccaccacctactccatctacctcaaggcctactcc
ccactgggcgccagccagcagtccagcactgtggtcgccacaacactagggggcgtgccc
tctccccctaccttcttcaccaaggtggtgaactccactgcagtccaggtgctatgggag
ctccccagcaagcctggcaaggcagagggcttcaggctcacctaccgcagggtcccccat
gccgacttccaggggccagttcagttcccttgccacgtcaatgcccacaccatctcccgc
cttgaaaccggcgcggtgtatgaagtcaaactagtggcctataatgggaacggcgagagc
gactgctccaagaggctggtgtcactggcagaagaaggcaccagttccaaaaccagtggg
gagaaccagtgtacctgtagacaggagagcgagggctcgatgggtggtatagtggtgggc
attcatatcggcatggcctgcatcatcttctgtgtactcttcctcatgtttggataccgt
cacagtaaagggactcagtacagctggtctgttccaagaggggaggaccggggacagctg
ggacaaaacgggatccccaaagagggggtcactcgtcctgtagaagtcaccctggagtta
gtgcctcagagtcatgactctacctttcatggaggggctccggtgcgtccggcccaatgc
caggtcctcatcgagcagcactcgtttggtctgcctggcatgggcacaggctaa
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