Salvelinus namaycush (lake trout): 120026852
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Entry
120026852 CDS
T07522
Name
(RefSeq) tubulin beta chain isoform X1
KO
K07375
tubulin beta
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
snh04517
IgSF CAM signaling
snh04540
Gap junction
snh04814
Motor proteins
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120026852
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120026852
09144 Cellular community - eukaryotes
04540 Gap junction
120026852
09142 Cell motility
04814 Motor proteins
120026852
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120026852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120026852
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120026852
04147 Exosome [BR:
snh04147
]
120026852
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120026852
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120026852
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120026852
Exosomal proteins of colorectal cancer cells
120026852
Exosomal proteins of bladder cancer cells
120026852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
DUF5008
Motif
Other DBs
NCBI-GeneID:
120026852
NCBI-ProteinID:
XP_038827490
UniProt:
A0A8U0PLY3
LinkDB
All DBs
Position
Sna32:complement(8543805..8549234)
Genome browser
AA seq
445 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLDRISVYYNEASGGGKY
VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV
VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV
VEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC
LRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQVFDAKNM
MAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR
GLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
SEYQQYQDATAEEEGEFEEEAEEDA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaattgtacacattcaggccgggcagtgcggtaaccagattggggccaagttc
tgggaggtgatcagcgatgaacatggcatcgaccccacgggctcctaccatggagacagc
gacctgcagctggacaggatcagtgtctactacaacgaggcttcaggaggtggcaagtat
gtacccagagcggtcctagtggacctggagcccggcaccatggactctgtcagatccgga
ccgttcgggcagatcttcagaccagacaactttgtgtttggtcagagcggtgcaggaaac
aactgggcaaagggccactacactgagggagcagagttggtggactcggtcctggatgtg
gtgaggaaagaagctgagagctgcgactgcctccagggcttccagctcacccactccctg
ggtgggggcactggctcgggcatgggcaccctgctcatcagcaaaatccgtgaagagtac
cccgaccgcatcatgaacaccttcagcgtagtgccctcccctaaagtgtcagacactgtg
gtggagccctacaatgccaccctgtcagtccaccagctagtggagaacacagacgagacc
ttctgcattgacaacgaggctctctacgacatctgcttccgtaccctcaaactcaccacg
ccgacttacggagacctcaaccacctggtgtcggccaccatgagcggagtcaccacttgc
ctgcgtttccccggtcagctcaacgccgacctccgtaaactggccgtcaacatggtgcct
ttcccccgtctccacttcttcatccctggcttcgcacccctcaccagcagggggagccag
cagtaccgtgccctcaccgtgcctgagctcactcagcaagtgttcgacgccaagaacatg
atggccgcatgtgacccgcgtcacggtcgctacctcactgtcgccgctgtcttccgtggc
cgcatgtccatgaaggaggtggacgagcagatgctcaacgtccagaacaagaacagcagc
tacttcgttgaatggatccccaacaacgtcaagaccgccgtctgcgacattcctccaaga
ggcctcaaaatggccgtcaccttcatcggcaacagcacagccatccaggagctgttcaag
cgcatctctgagcagttcaccgccatgttccgccgcaaggccttcctccattggtacacc
ggagagggcatggacgagatggagttcaccgaggcagagagcaacatgaacgacctggtg
tctgagtaccagcagtaccaggacgccaccgccgaggaggagggagagtttgaggaggag
gctgaggaggacgcttaa
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