KEGG   Salvelinus namaycush (lake trout): 120026852
Entry
120026852         CDS       T07522                                 
Name
(RefSeq) tubulin beta chain isoform X1
  KO
K07375  tubulin beta
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04145  Phagosome
snh04517  IgSF CAM signaling
snh04540  Gap junction
snh04814  Motor proteins
snh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    120026852
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120026852
  09144 Cellular community - eukaryotes
   04540 Gap junction
    120026852
  09142 Cell motility
   04814 Motor proteins
    120026852
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120026852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:snh03036]
    120026852
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:snh04812]
    120026852
   04147 Exosome [BR:snh04147]
    120026852
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120026852
Cytoskeleton proteins [BR:snh04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120026852
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120026852
  Exosomal proteins of colorectal cancer cells
   120026852
  Exosomal proteins of bladder cancer cells
   120026852
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 120026852
NCBI-ProteinID: XP_038827490
UniProt: A0A8U0PLY3
LinkDB
Position
Sna32:complement(8543805..8549234)
AA seq 445 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLDRISVYYNEASGGGKY
VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV
VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV
VEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC
LRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQVFDAKNM
MAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR
GLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
SEYQQYQDATAEEEGEFEEEAEEDA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaattgtacacattcaggccgggcagtgcggtaaccagattggggccaagttc
tgggaggtgatcagcgatgaacatggcatcgaccccacgggctcctaccatggagacagc
gacctgcagctggacaggatcagtgtctactacaacgaggcttcaggaggtggcaagtat
gtacccagagcggtcctagtggacctggagcccggcaccatggactctgtcagatccgga
ccgttcgggcagatcttcagaccagacaactttgtgtttggtcagagcggtgcaggaaac
aactgggcaaagggccactacactgagggagcagagttggtggactcggtcctggatgtg
gtgaggaaagaagctgagagctgcgactgcctccagggcttccagctcacccactccctg
ggtgggggcactggctcgggcatgggcaccctgctcatcagcaaaatccgtgaagagtac
cccgaccgcatcatgaacaccttcagcgtagtgccctcccctaaagtgtcagacactgtg
gtggagccctacaatgccaccctgtcagtccaccagctagtggagaacacagacgagacc
ttctgcattgacaacgaggctctctacgacatctgcttccgtaccctcaaactcaccacg
ccgacttacggagacctcaaccacctggtgtcggccaccatgagcggagtcaccacttgc
ctgcgtttccccggtcagctcaacgccgacctccgtaaactggccgtcaacatggtgcct
ttcccccgtctccacttcttcatccctggcttcgcacccctcaccagcagggggagccag
cagtaccgtgccctcaccgtgcctgagctcactcagcaagtgttcgacgccaagaacatg
atggccgcatgtgacccgcgtcacggtcgctacctcactgtcgccgctgtcttccgtggc
cgcatgtccatgaaggaggtggacgagcagatgctcaacgtccagaacaagaacagcagc
tacttcgttgaatggatccccaacaacgtcaagaccgccgtctgcgacattcctccaaga
ggcctcaaaatggccgtcaccttcatcggcaacagcacagccatccaggagctgttcaag
cgcatctctgagcagttcaccgccatgttccgccgcaaggccttcctccattggtacacc
ggagagggcatggacgagatggagttcaccgaggcagagagcaacatgaacgacctggtg
tctgagtaccagcagtaccaggacgccaccgccgaggaggagggagagtttgaggaggag
gctgaggaggacgcttaa

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