Salvelinus namaycush (lake trout): 120026940
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Entry
120026940 CDS
T07522
Name
(RefSeq) homeobox protein Hox-A3a-like
KO
K09303
homeobox protein HoxA/B/D3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120026940
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120026940
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Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
120026940
NCBI-ProteinID:
XP_038827646
UniProt:
A0A8U0TSJ7
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Position
Sna32:27813478..27849198
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AA seq
422 aa
AA seq
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MQKATYYDSSAIYSGYPYQSANGFSYDANQVQYPRASHVESEYHRPACSLQSPDGSVALQ
KPGEIAESCDRSTAIQAAQPPVLTDSNQPQVSVSVPPPPLQSQSPGSLNQNKSNGSSQAD
SNGPVHGSPTSTTRKHIFPWMKESRQNQKPKTSSSSSVESCQGDKSPTGGSAASKRARTA
YTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGCGMMP
SPGGQSPRSPLGPSPSSGGGGYLNSMHSLVNSVPYASQSPTSYNKPAHNAYGMPTSYPPP
LNSSLNNCPPSQKRYPGTGGSPTPEYDAHPLQGNGGYGAHLQQGSPVYVSGGYVDSMPNN
GSSIFGLTHLSHPPSTHMDYNGAITMGNSHHHGLCDPNPTYTDLTPHYSQGRIQEAPKLT
HL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaggcaacctactacgacagctccgcaatttacagtggctacccgtatcaaagc
gcaaatggcttcagttatgacgccaatcaggtccaatatccccgggcctctcatgtggaa
agtgagtaccatcgacccgcctgctccctgcagtccccagacggctcggtcgcactgcag
aagccgggggagatagcagagagctgtgataggagtacggccatccaggcggcgcagcca
cccgtcctcaccgacagcaatcaaccacaggtgtcggtgtctgtcccgccaccccctctc
cagtcacagtcccccggttctctcaaccagaacaagagcaacggctccagtcaagccgac
tcaaatggccccgtacacggctcaccgacctccaccacccggaaacacatcttcccatgg
atgaaagagtcccgtcagaaccagaagcctaaaaccagtagctccagctcagttgagagt
tgccaaggagacaagagccccacgggcgggtcagccgcgtcgaagagagcccggacggct
tataccagcgcacagctggtggaactggagaaggagttccacttcaaccgttacctctgc
agaccccgcagggtcgagatggccaacctgctcaacctcacggagcggcagattaagatc
tggttccagaaccgcaggatgaagtacaaaaaggatcagaaagggtgcggcatgatgccc
tctcccgggggacagtcccctcggagtcccctcggtccatctcccagtagtgggggtgga
ggatacctcaactctatgcattctctggttaacagtgtcccctatgcgtcccagtcgcca
acgtcttacaataagcccgctcataatgcatacggtatgcccacgtcatatccccctccc
ttgaacagctccctaaacaactgcccgccctctcagaagagatatcccgggactggcggc
tcgcccacgcccgagtatgacgcgcatcctctccaaggcaatgggggctatggggcgcac
ttgcagcagggcagccctgtgtatgttagcggaggctacgtcgattcgatgcccaacaac
gggtcctccattttcggcctgacccatctctcgcacccgccgtccacacacatggactac
aatggagcaatcactatgggcaatagtcaccatcacggactgtgtgatccgaacccgacg
tacacagaccttacgccgcactactctcagggaagaattcaggaagcgcccaaacttacg
catctgtag
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