Salvelinus namaycush (lake trout): 120026952
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Entry
120026952 CDS
T07522
Name
(RefSeq) serine/arginine-rich splicing factor 9-like isoform X1
KO
K21123
serine/arginine-rich splicing factor 9
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120026952
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120026952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120026952
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
SR proteins
120026952
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120026952
NCBI-ProteinID:
XP_038827713
UniProt:
A0A8U0PMA1
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All DBs
Position
1:29190765..29203407
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AA seq
327 aa
AA seq
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MVLWKLRYLTMLLRSSVNIMADGRIYVGNLPADVQERDIEDIFFKYGKIRDIELKNNRGT
IPFAFVRFEDPRDAEDAVYGRNGYGFGDCKLRVEHPRSASSKFNGSMGGSGRGSGDGGPG
GPKGRFGPPTRRSEFRVIVTGKWIKSAFVFVFLIQSSSLPSIYSRLDVHWYCWALPIKAK
VLNGLLSVPTGLPPTGSWQDLKDHMREAGDVCFTDVQRDGEGVVEFLRREDMEYAMRRLD
RTEFRSHQGETSSIRVHGEMGASRGRSRSRSRSRGRYSPAYQGRGSPPPRYQSPPARRLS
RHSPPPRRSSAAHRSPSSRSPPPRHYR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggttttgtggaaacttcgatatttaacgatgctcctacgaagttctgttaacatcatg
gcagatggcaggatctacgtgggtaaccttccagctgatgtgcaagagagggacattgag
gatatattcttcaaatatggcaaaatcagagacattgagttgaagaacaacagaggcact
attccctttgcctttgtgcgctttgaagatccacgggatgccgaggatgcagtctatggg
aggaatggttatggatttggagactgcaagcttcgcgttgagcaccctcgctctgcctcc
tctaaattcaacggttctatgggtggtagtggtcgagggagtggggacggaggtcccggt
ggtcctaaagggaggtttgggcctcctactcggagatcagagttcagagttattgtgact
ggtaagtggataaagtctgcttttgtttttgtttttttaattcaaagctcctctcttcct
tccatttacagcaggttagatgtacactggtattgttgggcgttgcctataaaggccaaa
gttctcaatggtttgctctctgttcccacaggcctgcctccgactgggagctggcaagac
ttgaaagatcacatgagggaggctggagatgtttgtttcacagatgttcagcgggatggg
gaaggggtggtggagttcctgcgcagagaggacatggagtatgccatgcggcgcctggac
aggacagagttcagatcacaccagggggagacttcatctatccgagtccatggagagatg
ggggccagcagaggacgctcgcggtcccgttccagatccaggggacggtactcacccgct
tatcaaggtcgcggctctccaccccctcgttatcagtcaccccctgctcgcagattgtct
cgccatagcccccctccacgtcgctcctctgcagcacaccgtagcccatcaagccgcagc
ccaccccctcgtcactaccgatag
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