Salvelinus namaycush (lake trout): 120026981
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Entry
120026981 CDS
T07522
Name
(RefSeq) protein Jumonji-like isoform X1
KO
K11478
protein Jumonji
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120026981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120026981
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
120026981
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
120026981
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
120026981
NCBI-ProteinID:
XP_038827731
UniProt:
A0A8U0TTZ3
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Position
Sna32:complement(13712938..13808199)
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AA seq
1296 aa
AA seq
DB search
MSKERPKRNIIQKKYDDIDGIPWSEERDVRKVLYLSLKEFKTAQKRQLGDGTKYTNGSHA
RGQLNGLGQKGHKADGLRFQSTNGSSEYSEDGPAKKRPRLQAQRKFAQSQPNSPSTTPVK
VSDTALPAPSAHIRDISRRKPKTEDFLTFLCLRGYSSWPNEGSSALPSNMAYFGSSQDED
ELDDDDEEEYEDVKPDISVASTSCQSTPRKGKPPGKHAVNGHVLNGHSKSPRDSPKPRGK
EWVQVRERSERAEARREQALSQPEATARGHTLPRGHTTNGLPHRRAAEEPRKQVFKVNGV
TRVSQPGVHTAGAQKTKDFRLPSKTVKGQVTYTKAKRELVKKTKLNHRKHSTAASHRANS
NNHHRHQRLPLSNSGKAQNSKAKTRKQVLLSNGVYKVANGGGVRLNGRLCAKQEVGRQGR
EGLRNSKRRLEVAVAAIGAVADSQGQLVILENNPNPKKTKQHQTSPLETRSKKACQDKTL
VPNGHIVMETTPPPTLLAPPPPPTPPATPPANPEPERQRPKRASAGKLMFIRQAQQRAQV
ASNPNHNRSTTSESPCHTSGHNPGHIPHKPAEPRPDREWEREKERERERAERSRVSWAAL
GEAPVFCPTQREFQDPLVYLDSVREGAEPCGLCRVVPPADWRPECKLNDEMRFVTQVQRI
HKLGRRWGPNVQRLACIKKHLKSQGITMEDPPLIGGCEVDLARFFQLINDMGGMQQVMDL
KKWSKLADLLRIPKSAQDRLAKLQESYLQYLLSYDSLSPEEHRRLEREVLQEKEGLERLR
GPLEGHTERSLVLPRYEPKNGLAGSLVQRSNGQLCSRLKELDTQQLKVGRRRLFAQEKNN
GDKTQQDEEEADMEKGVLSDQHKCIYKGKSVSLTNFFRIARNTMTMCFNKEPGAAEVEQE
YWRIVEQRHCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGWNLTVLPNNSGSILRHLGAV
PGVTIPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEEKVKLDKVVHTLLQ
ANGTPGLEMLEKNIMISPEVLCREGIKVHRTVQQSGQFVVCFPGTFVSKVCCGYSVSETV
HFATPQWMNLGYEASKDLKCRHIAKPFSMEKLLYQIATAESKRENGHLLTTISALLKDLR
NIEMRQRQELYEAGLLSSARYGTHDNNLVPGDGRKKPRKWLALESSERRCQTCQHLCYLS
MVVQENENVVFCLECALRYVENHKSCRGLKMMYRYDEEQINSLVKQVCGKALEKTTEKCN
AASPFKPPPKRGPRKRATVEVSLSRLSSHLSPAAVS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacctaagaggaatatcatccaaaagaaatacgatgacatagatggg
atcccctggtcagaggagagggatgtgaggaaggtgctctatctctccctgaaggagttc
aagactgctcagaaaaggcagcttggagatggaaccaaatacacaaatggttcacatgcc
cgcggccagctcaacggcttggggcagaagggccacaaggctgacgggttgcggttccag
agcacaaatggcagcagcgagtactctgaggatggtcctgccaagaagaggcccagactg
caagcgcagaggaagtttgcccagtctcagcccaactctcccagcaccacgccggtcaag
gtgtctgataccgccctgcccgccccctccgctcacatcagagacatctccagacggaaa
cccaagactgaggacttcctcaccttcctctgcctgagaggttactcctcctggccaaat
gaaggttcgtcagcgttgcccagtaacatggcgtactttgggagctctcaggatgaagat
gagctggatgatgatgatgaagaggaatacgaggatgtgaagccagacatcagtgtggcg
tctacttcctgtcaatccacgcccaggaagggcaaacccccagggaaacatgccgtcaac
ggccacgtgttgaatggccacagcaagtcgccccgggacagccccaagcccagagggaag
gagtgggtgcaggtgagggagcgcagtgagagggccgaggcccggagggagcaggccctc
agccagccagaggccacagccaggggccacaccttacccagaggccacactaccaatgga
ctgcctcacaggagggctgcagaggagccccgcaagcaggtctttaaagtgaacggcgtc
acacgggtgtcccagccaggcgtgcacacggccggtgcccaaaaaacgaaagacttcaga
ctgccgtccaaaactgtgaagggccaagtcacatacaccaaagcaaaacgagaactggtc
aagaaaaccaaactgaaccaccgcaaacacagcactgctgcttcccatagagccaatagc
aacaatcaccaccgccaccagcgactccccctctccaactcaggaaaagcccagaatagc
aaagcaaaaacacgcaaacaggtgttattatccaatggggtgtacaaggtggctaacggg
ggcggtgtgcgcctcaacggtcgcctctgtgccaagcaggaggtgggcaggcaggggcgt
gaggggctgaggaactccaagcggaggctggaggtggcggtagcagccatcggggcggtg
gctgactcccagggtcagctggtcatcctggagaataaccccaaccctaagaagacaaaa
cagcaccagaccagccctctggaaacacgcagtaagaaagcctgtcaggacaagaccttg
gtccccaacggacacatcgtcatggaaaccacccctcccccgaccctgctagccccaccc
cctcccccgactcctcccgccacaccaccagccaatccagagccagagcgccagcggccc
aagcgggcgtcagccggcaagctgatgttcatcagacaagcacagcagcgggcgcaggtt
gcctctaaccctaaccacaaccgctcaactacctcagaatccccttgccacacttctgga
cacaatcctggacatatccctcacaaaccagcagagccccggcctgacagggagtgggaa
agggagaaggagagggagagagagagggcggagaggagtagggtgagctgggcggcgttg
ggtgaggcgccagtgttctgtcccacccagcgggagttccaggaccccctggtgtacctg
gactctgtgcgggagggggcagagccctgcggactttgtcgtgtggttcccccggctgac
tggcgcccagagtgcaaactgaacgatgagatgcgctttgtgacccaggtgcagcgcatc
cacaagctgggccgtcgctggggccccaatgtacagaggctagcctgcatcaagaagcac
ctcaaatctcagggcatcaccatggaagaccccccgctcatcggtggctgtgaggtggac
ctggctcggttcttccagctgattaatgacatgggcggcatgcagcaggtgatggacctg
aagaagtggagtaaactggctgatctgctgcggatccccaagtcagcccaggaccgtcta
gccaagctgcaggagtcctacctccagtacctgctgtcgtatgactctctgtcccccgag
gagcaccgacgcctggagagggaggtgctgcaggagaaggagggcttggaacgcctcagg
gggcccctggagggccacacagagaggagcctggtcctgccgcgctacgagcctaagaac
gggctggccggcagtctggtgcagcgcagcaacggtcagctgtgcagccggctgaaggag
ctggacactcagcagctgaaggtgggacgccggaggctgttcgctcaggaaaagaataat
ggggacaagacacagcaggatgaagaggaggcggatatggagaaaggcgttctcagtgac
cagcacaagtgtatttacaaggggaaatctgtatctctcaccaacttctttaggatagcc
aggaacaccatgaccatgtgctttaacaaagagcccggtgctgctgaggtcgagcaagaa
tactggaggatagtggagcagaggcactgccatgtggcagtgcattatgggaaagtggac
accaacacacacggaagtggcttccccgtgggaaagtcagagccattttctaaacatgga
tggaacctcactgtcctcccaaataattctggatccattctgcggcatcttggagccgtg
cccggggtgaccattccctggctgaacattggcatggtcttttctacctcatgctggtct
cgagaccaaaaccgccttccatacattgattacttacacactggtgctgactgcatttgg
tattctgttcctgctgaagagaaggtgaagcttgacaaggtggttcacacactgctgcag
gccaacgggactcccgggctggagatgctggagaagaacatcatgatctctccggaggtg
ctttgtcgagagggtatcaaggtccaccgcaccgtccagcagagcggtcagtttgtggtc
tgcttccctgggacctttgtgtccaaggtctgctgtggctacagtgtgtcggaaaccgtt
cactttgccaccccccagtggatgaacctgggatacgaggcttctaaggaccttaaatgc
cggcacatagccaaacccttctccatggagaagttactctaccagatcgccacggccgaa
tccaaacgcgagaacggacaccttctgacaacaatctccgctcttctcaaagacctcagg
aacatagagatgagacaacggcaggaactgtacgaggcggggcttctgtcttctgcccgc
tacggaacacacgacaacaacctggtgcccggcgacggacgcaagaaacccaggaagtgg
ctggcactagagtcctcagagagacgctgccagacctgccaacacctctgctacctgtcc
atggtggtccaggagaatgagaatgtggtcttctgtctggagtgtgctctgagatacgtg
gagaatcacaagtcctgcagaggcctcaagatgatgtatcgttatgatgaggagcagatc
aacagcttggtgaagcaggtgtgtggcaaggccctggagaagacgactgagaaatgtaat
gctgcgagcccctttaaaccaccacccaaacgcggtccccggaagagagccaccgtggaa
gtgtccctgtcccgcctctcctcccacctgtctcccgcagccgtctcataa
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