Salvelinus namaycush (lake trout): 120027064
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Entry
120027064 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q4-like
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snh03032
]
120027064
03400 DNA repair and recombination proteins [BR:
snh03400
]
120027064
Enzymes [BR:
snh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120027064
DNA replication proteins [BR:
snh03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
120027064
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
120027064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Spo0M
Adeno_L433K_22K
Motif
Other DBs
NCBI-GeneID:
120027064
NCBI-ProteinID:
XP_038827835
UniProt:
A0A8U0PMJ6
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All DBs
Position
Sna32:complement(23574376..23586879)
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AA seq
796 aa
AA seq
DB search
MGKSLCYQLPAYLYAQRSNSITLVVSPLVSLMDDQLSGLPSKLKAAAVHSNMSKKQREAA
IEKVKAGEVHVLLLSHEALVGGGHSGFGCLPPADQLPPVAFACIDEAHCVSEWSHNFRPC
YLRLCKVLRDRLGGRCLLGLTATATLSTALDIAQHLDITDQDGIAVHSAAVPDNLQLSVS
MDRDKDQALVSLLKGERFGSLESVIVYCTRRDETTRISALLRTCLQGVLLKDSNRTASQE
EDDNPIGKKKKALARKKIRKPLKWMAESYHASMSSSERRRVQNNVLCGELRVVVAMVAFG
MGLDKSDECGIVHYNMPKSFESYVQEIGRAGRDGVPAHCHLFLDPEGGDLCELQRHIYAD
TVDYYTVKKLVQKVFPPCKCRQIYQKYKAQEEVDDSEMMELMDTCDETSAAAPEQTKETS
QNTPVEQLEQAKVPTEDKDVPTLQPSEGKQKEPPELSVPLPRRGDGEQEVEEEEGPGGGD
DWSTTRVCHTHERAIPMQDTVEALDITEEGLETLLCYLELHRQQYVELLHPTLSVCKIVC
YNGPQQLCKLTKICLPVAGVLAQKRMAGEXVEAYDLLDFDVVEVADTMGWQLGLVKRGLR
QLQWATNRGVSVEFSNLSFYFRSYGDLTPDEMDRVCEFLHGRVVAQESTKLYQLKACFMA
FRSVAYKRCSFCTDELDERRSLKQQGLLGDYFDKRRDLDLSRKFQGEKDGEDEEVLMKCK
MMDWEAQIRADIQSFLGNHIDEKLSGRAVARIFHGIGSPCYSAQTFGRDWRYWRKYIQFD
FNEIIRFAIQEIVRFK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtctctgtgctaccagctgcctgcctacctctatgcccagaggtccaacagt
atcactcttgtggtatcaccactggtatctcttatggacgatcagctatctggactccca
tccaaactgaaagcagctgctgttcactccaatatgtctaaaaaacagagggaggcagcc
attgaaaaggttaaggcaggtgaggtccatgtcctgctcctgtcccatgaggcgttggta
ggtggaggtcactctggctttggctgtctgcccccagctgaccagctccccccagtggcc
tttgcctgtattgatgaggcccactgtgtctcagagtggtcccacaacttcaggccctgc
tacctgcgtctctgcaaggtgttgagggaccgtctgggcgggcgttgcctgctgggtctg
actgccaccgccaccctgtccacagccctggacatcgctcaacacctggacatcactgac
caggacggtatcgctgtccactcggccgccgtgcctgacaacctgcagctgtctgtctcc
atggaccgagacaaggaccaggccctggtgtctctgctgaagggagagagattcgggtct
ctggagtccgtcatcgtctactgcaccaggagagacgagacgacccgtatatctgccctg
ctcaggacctgcctccagggggtgctgttgaaggattctaaccgtacagccagccaggag
gaagatgacaaccctatagggaagaagaagaaagctttggccaggaagaagatccgtaag
cctctgaagtggatggctgagtcctaccacgccagcatgtcgtcatccgagcgccgtcgt
gtccagaacaacgtcttgtgtggagagctgcgcgtggtggttgccatggtagccttcggc
atgggcctggacaagtcagacgagtgcggcatcgtgcactacaacatgcccaagagcttt
gagagctacgtgcaggagatcgggagggcagggagagacggagtaccggcccactgtcat
ctcttcctggatcctgagggaggggacctgtgtgagttgcagaggcacatctatgcagat
acggtggactactacactgtgaagaagctggtgcagaaggtgtttcctccctgcaagtgc
agacagatctaccagaagtacaaggctcaggaggaggttgacgactccgagatgatggaa
ctgatggacacctgtgatgagacctctgctgcagcaccggaacaaacaaaggagactagt
caaaacacccccgttgagcagttggaacaggccaaagtccctactgaggacaaggatgta
ccaactcttcaaccatcggaggggaagcagaaagaaccaccagagttgagtgttccactt
ccccggagaggggatggcgaacaggaagtggaagaggaggaggggccagggggaggtgat
gattggtccacgactagggtgtgtcacacccatgagagggccatccctatgcaggacact
gtggaagccctggacatcactgaggaaggtttggagactctgctgtgctacctggagctg
caccgtcagcagtacgtagagctgctccaccccaccctctccgtctgtaagattgtctgt
tacaacggccctcagcagctctgcaaactcaccaagatctgcctacctgttgccggggtg
ttggcccagaaacggatggcaggggagtgagtggaggcctatgatttgctggactttgac
gtggtggaggtggcagacactatgggctggcagctgggtctggtgaagagaggtctcaga
caactacaatgggccacaaacagaggagtctcggtggagttctccaacctgtccttctac
tttcgttcctacggtgacttgaccccggacgagatggaccgagtgtgtgagttcctgcat
ggcagagtggtggcccaggagagcaccaagctgtaccagctcaaagcctgcttcatggcc
ttccgcagtgtcgcatacaagaggtgcagtttctgcacggacgagctggacgagaggcga
agcctgaagcagcaagggcttctgggggattactttgacaagaggagagacctggacctg
agcaggaagttccagggagagaaggatggagaggacgaggaggtgttgatgaaatgcaag
atgatggactgggaggctcagatcagagcggatattcagagtttcctgggcaaccacatt
gatgagaagctctctggcagagctgtcgctagaatattccatggaattggaagtccatgt
tactcagctcagaccttcggcagggactggagatactggagaaaatacatccagtttgat
ttcaatgaaatcatccgttttgctattcaggagatcgttcgattcaagtga
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