Salvelinus namaycush (lake trout): 120027067
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Entry
120027067 CDS
T07522
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
snh04814
Motor proteins
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120027067
09142 Cell motility
04814 Motor proteins
120027067
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120027067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120027067
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120027067
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
120027067
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120027067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_SPT8
Beta-prop_EIPR1
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
120027067
NCBI-ProteinID:
XP_038827839
UniProt:
A0A8U0PQB2
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All DBs
Position
Sna32:complement(24041810..24080045)
Genome browser
AA seq
400 aa
AA seq
DB search
SLSLPLPPSIPLSLSPSPSLSSPSASIPLSLSPSPSLSPFRPLYPSLSLSTEEEEEDEEI
TELKPDPESDQQEEEDTKEMKEGYPCRELTEEEKQQILKSEEFLSFFDCSIRVMERALAQ
DSDIFFDYSGRDLDDKEGDLQGGSSLALSRLFYDEHWSKHRVITCLDWSPQYPELLVASY
NNNEDAPHEPDGVALVWNMKFNKNTPEYVFHCQSPVVSVGFARFHPNLVVGGTYSGQIVL
WDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQ
ESMELVYNKSKAVAVTGMAFPTGDVNNYVVGSEEGTVYTASRHGSKAGICEMFEGHQGPV
TGLSCHNAVGPVDFSHLFVTSSFDWTVKLWSTKVEEPVCV
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
tccctctctctcccccttccgccctctatacccctctctctctctccctctccctctctc
tcctccccttccgcctctatacccctctctctctctccctctccctctctctcccccttc
cgccctctatacccctcgctctctctttctacagaggaggaagaagaggatgaagaaatc
acagagctgaagcctgatcctgaatctgaccagcaggaggaggaggacaccaaggagatg
aaagagggctacccctgcagggagctgacagaggaagagaagcagcagatcctcaaatca
gaggagttcctcagtttctttgactgcagcatcagagtgatggagagagccctggcccag
gactcagacatcttctttgactacagtggacgagacctggatgacaaggagggggactta
caaggcggttccagtctggccctcagtaggctattctatgacgagcactggtccaaacat
cgagtcattacctgtctggactggtcccctcagtatccagagctgttggtggcgtcctac
aacaacaatgaggatgctcctcacgagcctgacggtgtagctctggtctggaacatgaag
tttaacaagaacacacctgagtatgtcttccactgccagtcacccgtggtgtcagtgggc
tttgctaggttccatcctaacctggtggtgggggggacctactctggccagatagtcctg
tgggacaaccgcagccaccgcagaactcctgtacagagaacccccctctcagctgcagct
cacacgcacccggtgtactgtgtgaacgtggtgggaacacagaacgccaacaacctgatc
accgtgtccacagacggcaggatgtgctcctggagtcttgacatgctctctcagccacag
gagagcatggagctggtgtacaacaagtctaaggctgtggctgtgacaggcatggcgttc
cccactggagacgtcaataattatgtggtggggagtgaggagggaaccgtgtacaccgca
tccagacacggcagcaaggcggggatctgtgagatgtttgagggccaccaggggccagtg
acgggcctcagctgtcacaacgctgtcggccccgtagacttctcccatctcttcgtcacc
tcgtcttttgactggactgtcaaactgtggagcaccaaggtagaggaacctgtttgtgtc
taa
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integrated database retrieval system
