Salvelinus namaycush (lake trout): 120027081
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Entry
120027081 CDS
T07522
Symbol
map1lc3c
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3C
KO
K10435
microtubule-associated protein 1 light chain
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04137
Mitophagy - animal
snh04140
Autophagy - animal
snh04216
Ferroptosis
snh04371
Apelin signaling pathway
snh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120027081 (map1lc3c)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120027081 (map1lc3c)
04137 Mitophagy - animal
120027081 (map1lc3c)
09143 Cell growth and death
04216 Ferroptosis
120027081 (map1lc3c)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120027081 (map1lc3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120027081 (map1lc3c)
03029 Mitochondrial biogenesis [BR:
snh03029
]
120027081 (map1lc3c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120027081 (map1lc3c)
Membrane trafficking [BR:
snh04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
120027081 (map1lc3c)
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
120027081 (map1lc3c)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
120027081 (map1lc3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
120027081
NCBI-ProteinID:
XP_038827852
UniProt:
A0A8U0PMY7
LinkDB
All DBs
Position
Sna2:60705804..60706667
Genome browser
AA seq
143 aa
AA seq
DB search
MMPPFEKPQHPKSFKQRKSFATRKQEVAGIRTKFPTKIPVIIERYQREKYLPPLDKTKFL
VPQELSMTQFVTIIRNRMSLMQSQAFYLLINNSGLASMSLTMAQVYKDHKDDDGFLYMTY
ASQEMFGNCVEIHEELVPIAGNV
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgccatttgagaaaccacagcaccccaagtccttcaagcagagaaaaagcttt
gccacgagaaaacaggaggtcgcggggatccgaacgaagtttccaactaaaattcctgtt
ataattgaaaggtatcaacgggagaagtacttgccgcctcttgataaaacgaaattcttg
gtcccccaagaactttccatgactcagtttgtcaccataataagaaatcgaatgtcgctg
atgcagagtcaagcgttctacctgctcatcaataatagtggcctggccagcatgtctctt
accatggcgcaagtctacaaggaccacaaagatgacgatggatttctctacatgacatat
gcttctcaagaaatgtttgggaattgtgttgaaatccatgaagagttggtgccaattgct
ggaaatgtttga
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integrated database retrieval system
