Salvelinus namaycush (lake trout): 120027100
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Entry
120027100 CDS
T07522
Name
(RefSeq) CLIP-associating protein 2-like
KO
K16578
CLIP-associating protein 1/2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120027100
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120027100
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
120027100
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
120027100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
Cnd1
ParcG
Arm
IFRD
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
120027100
NCBI-ProteinID:
XP_038827867
UniProt:
A0A8U0PN00
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All DBs
Position
Sna32:complement(32944005..33065076)
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AA seq
1335 aa
AA seq
DB search
MEEHDNMEYLYQQVLQKDVTRRLQVGQDLIDYLNDPQRSSDVEQDKPRLDKTIDELTGWV
NSSNYKVALLGIDIAGAFVNRLGEHFRGYLGTVVPALVDRLGDSKDQVREQSHNLILRCM
EVTASPMYVWERLLPAFKHKNFRSREGVCLVLCATLNTYGAQALRLSKIVPHLCTLTGDQ
NPQVREAATASLVDVYRHIGERVRADLGKSGLPAARLQTIYGRFDEALNSGNMALSPTHD
RSFEDDADSADGNPAQAAFKVPKVPKKSAESSAARRPNITGSKIGGASKDGTGGIDEEDF
IKAFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDWDQRAAAMKKIRSLIVAGATEYECF
YQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEGILPVLFNLIPNCA
KVMATSGVSAIRFIIRHTHVPRLIPLITSNCTCKSVAVRRKCFDFLDLLLQEWQTQTLER
HTAVMVASIKKGIADADAEARVEARKAYWGLRNHFPGEADSLFNSLEPSYQKSLQSSLKS
SGSVTSLPQSDRSSSSSQESLNRPLSSKWSAAPGRVPAGHKGGASPGSLQRSRSDVDVNA
ATVAKQRHIGQVGPVRLTPGSYSSLDDASDKTDGRLRTKQPLTTATSVSQVDSRGRSRTK
MVSQSQPGSRSGSPGRVLTSTTLSTLGSGAQRVLAGTGGRRSRIPRSQGCSRDSSPTRLS
VAPSSVSSIYKATSRGARGSRIPRPSMSQGCSREASRESSRDTSPVRSFTPLGNPVSPVS
RQVFSMFLETLVDFVLVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQRALDITRESF
PNDLQFTILMRFTVDQTQTPNLKVKVAVLKYIETLTLQMEPQDFVNSSETRLAVSRIITW
TTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLAALPKTFQDGATKLLQNHLRITGNTAQA
PMGSPLARHTPRSPASWSSPLTSPTNTSQNTSTLGEFDYDTENMNSDDIYSSLRGVTEAI
QNFSVRSQEDMNETGGGADQVDGVRTALDNKTSLLNTPLLSSSPRGSRDPFTDSPFKHSI
KDTSLDESDQQTDDSSIDQSELVSELLKELSNHNERVEERKVALCDLLKLIRENTLQVCW
DEHFKTILLLLLETLGDREHVIRALALRVLREILSRQPWRFKNYAELTIMKALEAHRDPH
KEVARAAEEMAAMLASSISPDQCVKVLSPIIQSADYPINLAAIKMQTRVIERVPHHGLVT
MLPEIVPGLIQGYDNSESSVRKACVFCLVALYAVIGEELKPHLNQLSGSKLKLLNLYIKR
AQSGSSGGEPPPDSL
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcatgacaacatggaatatttatatcagcaggtcctgcagaaagacgttacc
cgcaggctgcaggtcgggcaggacttaatagactacctgaacgacccgcagaggtcctcc
gatgtggaacaagacaaaccccggctggataaaaccatagatgagctgacgggatgggtc
aactccagcaactacaaggtggcgctattgggaatagacattgccggggcgttcgtcaat
cgcctgggggaacactttagaggatacctgggaacagtggtcccagccctagtggacagg
ttgggggacagtaaggaccaggtcagagaacagagtcacaatcttatccttcgctgtatg
gaagtgaccgcatcgcctatgtatgtgtgggagaggttgcttcctgcttttaaacataag
aacttccgcagcagagagggggtgtgtctggttctttgcgccacgctcaacacgtatggt
gctcaggcgttgcgtctcagtaagatcgttccccacctctgcactctaactggagaccag
aacccacaggtgcgtgaggctgccacagcatcgctggtggatgtgtatcgccacatagga
gagagagtcagagccgacctgggaaagagtggcctgcctgccgcacggttacagacgata
tatgggcgttttgatgaagctttgaattctgggaacatggcgcttagccccactcacgac
cgtagctttgaggatgatgcggacagtgcagatgggaaccctgctcaggctgccttcaaa
gtccccaaggtccccaagaagtcggcagagtcctctgctgcacgaagacccaacattacg
ggttccaagatcggaggtgcgtctaaggatggaaccgggggcattgatgaggaagacttc
atcaaagctttcactgacgtccccacagtacagatctactcatctcgtgacctggaggat
aacctgaataagatcagagagatctgttctgatgacaaacatgactgggaccagagagct
gccgcaatgaagaagatccgctcgctgattgttgccggggcgacggagtacgagtgtttc
taccaacacctgaggctgttggacggagcgttcaaactgtcagctaaagacctccgatca
caggtggtacgagaggcctgcatcactgtggctcacctgtcgacagtgttgggtaataag
tttgaccatggggccgagggcattcttcctgtcctgttcaacctcatcccgaactgtgcc
aaggttatggccacttcaggggtgtctgctatacgcttcatcatacggcacacacacgta
cccaggctcattcccctgatcaccagtaactgcacatgcaagtctgtggccgtcagaagg
aaatgttttgacttcttggacctgctgctacaggagtggcagacccagactctggagaga
catacagcggtgatggtagccagcattaagaagggaatcgcagatgctgacgcagaggcc
agggtagaggcccgcaaggcatactggggtcttaggaaccatttccctggggaggcggac
tctctgttcaactcgttagaaccgtcctatcagaagagcctccaatcatctctcaagagt
tctgggagtgtgacgtctcttcctcagagcgaccgctcctcttcctcatcacaggagagc
cttaatcgtcctctgtcatctaaatggtcagctgctcctggaagagtcccggcgggtcat
aagggcggggcgtcgccgggctccctacagcgttcccgtagcgatgtagatgttaatgca
gcaacggttgctaagcagaggcacatcgggcaggtggggccagtgagactgacccccggc
tcctactcctcattggatgatgcctcagataaaacagatggtcgtctgaggaccaagcag
cctctcaccacggcaaccagcgtcagccaggtggactcccggggacgcagccgcaccaag
atggtgtcccagtcacaacccggcagtcggagtggttccccgggtcgcgtcctgaccagt
accactctgagtacgctgggttctggagcccagagggtcttagctgggacaggggggaga
cgtagccgcatcccccgcagccagggctgctcacgagactcctcccctacacgcctgtct
gtcgctccctccagtgttagttccatctacaaagcaacgagcagaggagctcggggaagt
cgtattcctcggcccagtatgagtcagggctgcagtagggaggccagcagagagagcagc
agagacaccagccctgtgcgttcctttacacctctgggtaaccctgtgtcccctgtctct
cgccaggtgttcagtatgttcttggagaccctagtggactttgttctggtgcacagagaa
gacctgcaggactggctgttcgtcctgctcacccagctgctgaagaagatgggagctgac
ctgctgggatcagtacaggccaaggtccagagagcactggacatcacacgagagtctttc
cccaacgacctccagttcactatcctcatgaggttcactgtagaccagacgcagacgcct
aacctcaaggtgaaggtggctgttctaaagtacattgagaccttgaccctgcagatggag
cctcaggactttgtaaactccagtgagacacgtctggctgtgtctcgcatcatcacctgg
accacagagcccaagagctccgacgtcaggaaggcggcccagtcggtactgatctccttg
ttccagttgaatactcccgagttcaccatgctgctggcagctctgcccaagaccttccag
gacggagccaccaaactgctgcagaaccacctgaggatcaccggcaacactgcacaggcc
ccgatgggaagccccctggcacgccacaccccccgctctcctgccagctggtccagcccc
ctcacctctcctaccaacacgtcacagaacacatccacactcggtgagtttgactacgac
acagagaacatgaactcagacgacatctacagtagtctgagaggagttacagaggccatt
caaaacttctccgtccgcagccaggaagacatgaacgaaacggggggtggtgctgaccag
gtggatggagtccgcactgctctggacaacaagacttctcttctcaacacccccctgctc
tcctcttctccccgggggtcccgagacccctttacagactccccctttaaacacagcatc
aaagatacttcattggacgaatcagaccagcaaactgatgacagcagcattgaccaatca
gagctggtgtctgagctgctgaaggagctgtccaatcacaatgagcgtgtggaggagagg
aaggtggcgctttgtgatctcttgaagctgattcgagaaaacaccctgcaggtctgctgg
gacgaacacttcaaaaccatcctcctgttactactggagacgctgggggacagagagcat
gtgatcagggcgttagctctgcgtgttctgagggagattctgagccgtcagccctggagg
tttaagaactacgctgaactcaccatcatgaaggctctggaggcgcacagggacccacac
aaagaggtggcgcgagcggcagaggagatggcggccatgttggcgtcgtccatcagtcca
gaccagtgtgtcaaggtgttgtctcccatcatccagtcagctgactaccccatcaacctg
gctgccatcaagatgcagaccagagtcatagagagggtcccccaccacggactagtcacc
atgctaccggagatagtccccggactcatacagggttatgacaactcggagagcagtgtg
aggaaggcctgtgtattctgtctggtggccctctatgcagtcataggggaggagctaaaa
cctcacctcaaccaactgtctggcagcaagttgaagttgttgaatctgtacatcaagcgt
gcccagtccggctccagtggtggtgagcccccaccagacagcctatag
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integrated database retrieval system