Salvelinus namaycush (lake trout): 120027184
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Entry
120027184 CDS
T07522
Name
(RefSeq) semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
snh
Salvelinus namaycush (lake trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
120027184
NCBI-ProteinID:
XP_038827994
UniProt:
A0A8U0TSW1
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Position
Sna32:complement(10020151..10148381)
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AA seq
1045 aa
AA seq
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MVPPERTRWRLLLAVLILTSCLLSTSATAPPFPKDLEPINVVRWEHSYLYPGFQGLVSDN
DTFRLGLDFQRMLRINHMLYIAARDHVFAVNLTTAGDDFVPQLKLTWRSKDVAKCTVRGR
NSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTTLEQVGEEVVGQARCPFESGQS
NLGLFAGGDFYSATMTDFLASDAVIYRSLGDDSPVLRTVKYDSKWLREPHFHHAIEYGNY
VYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFF
YFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKAFNGKFKEQKTSDS
AWTPVPEEQVPKPRPGSCAGDGPASAYKSSTTFPDDTLTFIKSYPLMDEAVPSVNDRPCF
TRTTSRYKLTQIAVDTSAGPSKDRTVVFLGSEDGRVLKVLSSTHSNASFGSQLLEDIDVY
NPSMCNIQGQEDRRILGMELDKDHHALFVAFTSCVIRVPLSRCTEHGACKKSCLSSRDPY
CIWLRTGSCANMAPGFKAGFEQDIEGDHSLYPENCHADVLATKRNQNSAADSAYGVRRLP
DMEKSSPSIHYTLLIACVLVAFFLGAILSGFLVSCYCSHNARRAHRLGKDPEASLHPALS
LRSLAKLNGLLDGQLKEEKLDVSTPKMYSSFVPNGKEHTPGRHGMSLGDPDLNLSQGENL
SGLPTPDSTPELPIKNMKAFRNEWERNQNCNNAKESKAPPGTGFGLGSSRSSSGVTQQVF
PFSHSLTNGQALGHLPEERKIPNDERAKGASASQSSSCYPQTVVDVAALDELLKHIHEVS
ASGSHSITVLTSPCAPLPGSSSSSHNHSHSQSSFRSQPQIPETESAPYYSSSTLPRDSLT
RRLDVPPDTAAASSAGATPLQQQSIPERGSVTRHHSQRHLMIKMGNGGAVPRQHSFRQGG
VGPPPHQLLTRMNSGGGGGGGVGFEAHRPLIPSACLTRQHSYSEPPHLHRAAIVRRTASL
KPQVPPKPLFLPATSPVNEQDNYNY
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggtccctccggaacggacaaggtggcgcctcctgctggcagtcctcatactcacttcc
tgtctactgtccacctcagccacggccccgcccttccccaaagacctggagccaatcaat
gttgtccgatgggagcactcctacctgtacccagggttccaggggctggtgtcggacaac
gacacattcagactaggcctggacttccagaggatgctgaggatcaaccacatgctctac
atcgctgccagggaccatgtttttgcagtaaacctgaccacagctggtgacgacttcgtc
ccccagctgaagctgacatggaggtccaaggatgttgccaagtgtaccgtgaggggtaga
aacagcgatgaatgctacaactatgtcaaagtgctggtaccgcggaacgacgagaccctg
tttgcttgcggcactaatgccttcaaccccacctgccgtaactacaagatgaccaccctg
gagcaggttggcgaagaggtggtgggtcaggcgcgctgtcccttcgagtcgggccaatcc
aacctcggcctctttgctggcggtgatttctactctgccaccatgaccgacttcctggcc
agcgacgctgtcatctatcgtagtcttggcgacgacagccccgtcctgcggaccgtcaag
tacgactccaagtggctccgagagccccatttccaccatgcgatcgagtatgggaattat
gtctactttttcctcagtgagattgcagtggagtacaccaccctgggaaaggtggtgttc
tctcgtgtggcacgggtgtgtaagaacgacaacggcggctctcctcgggtgctggagcgc
tactggacctccttcctgaaggcgcggctcaactgctcggtgcccggcgactcgttcttt
tacttcgacgtgctgcagtcgctcaccaacgtgctacagatcaaccagcgccccgcggtg
gtgggagtgtttactacgcaagctaacagtatccctggctcagcagtgtgtgccttctac
atggatgacatagagaaggcctttaatgggaagtttaaggagcagaaaaccagtgactca
gcctggaccccagtaccagaggaacaggtgcccaagcctagacctggttcctgtgccggt
gacggcccggcctctgcctacaagtcgtccaccaccttccccgacgacacgctgaccttc
atcaagtcttaccctctgatggacgaggcggtgccctccgtcaacgaccggccctgcttc
acccgcaccaccagcaggtacaagctgactcagattgcggtggacacctctgccgggccg
tctaaagaccgcactgtggtcttcctgggctcggaggatggcagggtcctgaaggtgttg
tccagcactcattctaacgcctcctttggctcccagctcttggaggacatagatgtgtat
aacccctcaatgtgtaacattcaggggcaggaggaccggaggattctgggaatggagctg
gataaggaccatcatgccttgttcgtggccttcaccagctgtgtcatcagagtaccactc
agccgctgcactgagcatggcgcctgtaaaaagagttgtctgtcctcccgcgacccatac
tgcatctggctccggaccgggagctgtgccaacatggcgccagggttcaaggctggcttt
gagcaggacatcgagggagaccactcactgtaccctgagaactgccatgcagatgttctg
gcgaccaagcgaaaccagaactccgcggcagactcagcctacggtgtccgaaggctacct
gacatggagaagtccagccccagcatccactacacgctcctgatcgcctgtgtcctggtg
gccttcttcctcggcgccatcctctccggcttcctggtgtcatgctactgcagtcacaac
gcccgccgtgcccaccggcttggcaaggaccctgaggcatccctccaccccgccctctcg
ctgcgcagcctggccaagctaaatggcctgctggacggccagctgaaagaggaaaagctg
gacgtgtctacgcccaagatgtacagctccttcgttcccaacgggaaggagcacactccg
ggcaggcatgggatgtccctgggagacccggaccttaacctctcccagggggagaacctc
tcgggcctgcccaccccggactccaccccggagctgcccatcaagaacatgaaggccttc
cggaacgagtgggagaggaaccagaactgcaacaacgcaaaggagtctaaggcaccgcct
ggcactggtttcggcctgggttcgtcgaggtccagctcgggggtcacccagcaggtgttc
cccttctcccacagcctgaccaatggccaagccctcgggcacctgcccgaggagaggaag
atccccaacgacgagcgtgcaaagggggcttcggcctctcagtcctcctcctgctacccg
cagacggtggtggatgtggcggccctggacgagctcctcaagcacatccacgaggtcagc
gcctcaggcagccacagcatcactgtgctgacctcaccgtgtgctcccctgccgggtagc
tccagctccagccataaccacagtcacagccagagcagcttcagatcccagccccagatc
cccgagacggagtcggccccgtactacagctcctccaccctgcccagggacagtctgacc
cgccgcctggacgtgcccccagacactgctgccgcctcctcagctggcgccaccccgctg
cagcagcagtccatccccgagcggggctcagtgactcgccaccactcccagaggcattta
atgatcaagatgggcaacggaggggccgtcccgcgccagcacagcttcagacagggcggg
gttgggccaccaccccaccagctgctcacccggatgaactctggaggtggtggcggggga
ggggttggctttgaggcccaccggccactcatccccagtgcctgcctgacacggcagcac
agctacagcgaaccgccccacctccaccgcgccgccatcgtacgccgcacggcctccctc
aagccccaggtaccccccaagcccctcttcctgcccgccacttcgcctgtaaacgagcaa
gacaattataactactga
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