Salvelinus namaycush (lake trout): 120027204
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Entry
120027204 CDS
T07522
Name
(RefSeq) homeobox protein OTX1 B-like isoform X1
KO
K09326
homeobox protein OTX1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120027204
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120027204
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
120027204
NCBI-ProteinID:
XP_038828027
UniProt:
A0A8U0PN46
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All DBs
Position
2:complement(61756394..61758964)
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AA seq
344 aa
AA seq
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MMSYLKQAPYGMNGMGLSGTAMDLLHPSVGYPAHPRKQRRERTTFTRTQLDILESLFGKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQSGNNAKVRPAKKKSSPTRESTG
SESSGQFTPPAVSSTGSSSSSSSGGTHPSGHGGQGLSSTSTSVTAPVSSIWSPAPISPAP
APPPVPDPAPPTSASCMQRSVSGTGGTSSYPVSYSQTAASYGQGYPAPASTGSYFGGVEC
SSYLAPMHSHHHPHHPHQLSPMTGSSMSGHPHHHIGQTSGHPHHHHPHHHQAYSGAGLAF
NSSDCLDYKEQTAAAAASSWKLNFNTTDCLDYKDQASSWRFQVL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacaggccccgtacggcatgaacggaatggggctcagtggtacg
gccatggacctactgcacccatcagtggggtatccagcgcatccgaggaaacagcggaga
gagaggacaacttttactcgtactcagctggacattctggaatcccttttcggcaagacg
cgctacccagacattttcatgcgggaagaagtcgcactgaaaatcaatttgcctgagtct
agagtccaagtatggttcaagaacaggagagccaagtgccgtcagcaggcccagagtgga
aacaatgctaaagtccggcctgccaagaagaagtcctctccaaccagggagagcacaggc
tcagagagcagtggtcagttcacccctccggcagtgtccagcaccggctcctcttcctct
tcctcttctggtggcactcatccctccggccatggaggccaaggcctgagcagcacttct
acctccgtcaccgccccagtgtcctccatctggagccctgcgcccatctccccggcccct
gcaccaccccctgtccccgaccctgctcccccaaccagtgcctcctgcatgcagaggtct
gtgtcaggtactggaggcacgtcctcctacccggtgtcctacagccagacagcggcgtcc
tatgggcagggctaccccgccccggcgtcaacgggctcctacttcggaggggtggaatgc
agctcgtacctggcccccatgcactctcaccaccacccccaccatccgcaccagctcagc
cccatgacgggctcctccatgtctggccacccgcaccaccatatagggcagacctcaggg
cacccccaccatcaccacccccaccaccaccaggcctacagcggggccgggctggccttc
aactcctcagactgtctggattacaaagaacaaacggccgcggccgcagcctcttcctgg
aagctcaacttcaacaccaccgactgcttggactacaaagaccaggcctcctcctggcgg
ttccaagtcttgtga
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