Salvelinus namaycush (lake trout): 120027216
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Entry
120027216 CDS
T07522
Name
(RefSeq) transformer-2 protein homolog alpha-like
KO
K12897
transformer-2 protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120027216
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120027216
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120027216
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120027216
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
SR proteins
120027216
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
Spem1
Motif
Other DBs
NCBI-GeneID:
120027216
NCBI-ProteinID:
XP_038828038
UniProt:
A0A8U0PNY2
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Position
Sna32:complement(27349160..27355114)
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AA seq
311 aa
AA seq
DB search
MSDLEDGHFDGRDSRSPSKSDRGSPVRVKSESRSGSPSPSRVAKHSESRSRSKSRSHSRR
HSNRRYSRSRSPSNRKKSRSYSPEYRKKKSQSASPNRRRPSSRSHDFRKETFSQGAGGGE
DARANPDPNQCLGVFGLSLYTTEKDLREVFGRYGPLAGVNVVYDQRTGRSRGFAFVYFER
IADSKEAMERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTQNGGGGERNNGGSGGG
GGRRGRDSYDRYDDRRGGGYDRGYDRGYDRGDRGYDRYDEYDKYSRRRSPSPYYSRYRSR
SRSRSYSPRRY
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacttagaggatggacactttgatggacgagactctcgctccccatccaaatcg
gaccgtggcagtcctgttcgggtcaagtcggagagcagatccggctccccgagcccatcc
cgggtcgccaaacactcagagtctcggtcccgctctaagtccaggtctcactctcgtagg
cactctaaccgccggtacagccgctctcgctccccctccaaccggaagaagtcccgctcc
tacagcccggaataccggaagaagaagagccagagtgcatcgcctaaccgccgccgcccc
agcagcaggagccatgacttcagaaaagagacattcagtcagggagcagggggtggtgag
gatgccagggcgaaccctgaccccaaccagtgtctgggggtgtttggactgagcttgtac
accacggagaaggacctgagggaggtatttggccggtacggccctttggctggggttaat
gtggtctatgaccagcgcaccgggcgctcccgtggcttcgccttcgtctacttcgagagg
atcgccgattccaaggaggcaatggagcgggccaacggtatggagctggatgggagacgt
attagagtggacttctctatcaccaagagggcccacacccctacgcctggcatctacatg
ggccgacccacacaaaatggtggtgggggggagcgaaacaatggcggcagcggtggtgga
ggagggaggaggggacgggactcgtatgacagatacgacgatcgacgcggtggcggctac
gaccgtggatatgaccgtggatacgatcggggagaccggggatacgacagatatgacgag
tacgacaagtacagtcgcaggcgctctccctcaccctactacagtagatacaggtcccgc
tccaggtctcgctcatacagcccacgacgatactaa
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