Salvelinus namaycush (lake trout): 120027396
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Entry
120027396 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like
KO
K09661
mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B [EC:2.4.1.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00510
N-Glycan biosynthesis
snh00515
Mannose type O-glycan biosynthesis
snh01100
Metabolic pathways
Module
snh_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120027396
00515 Mannose type O-glycan biosynthesis
120027396
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120027396
Glycosyltransferases [BR:
snh01003
]
Glycan extension
Wide specificity
120027396
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_18
Motif
Other DBs
NCBI-GeneID:
120027396
NCBI-ProteinID:
XP_038828245
UniProt:
A0A8U0TU98
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Position
Sna2:64094605..64239284
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AA seq
802 aa
AA seq
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MITGNIDGKIMVRRWLVTFKPFRIFVVGIGFFSLCFLMTSLGGQFSAKRLGDSPFTIRTE
VMGGVESRGVLRKISDMLEVILKRMDSLSKLDNRSLLYGAGLDANFPAKQMQTCSGLVER
IQAIAQNVSNMAVRVEQILQNSMAAGRAVRDGSSGQCEVPRDPRYPDCPGKVDWMRARWT
SDPCYAFYGVDGSDCSFLIYLSEVEWFCPPLAWRNQTSVSLSPSRSPSPSLXAAFRTDLS
SLLDQVGTGKESLSFMKRRMRRLASQWGTAAQRLHSKLRQRWREQKKILVHVGFLTEESG
DVFSPKVLKGGPLGEMVQWADILTALHVLGHNLKISMSVKELQGFLGVPPGRGSCPLTGP
LPFDLIYTDYHGMQQMKQHMGLSLKRHKCHIRVIDTFGTEPAYNHEDYATLHGYRTNWGY
WNLNSRQYMTMFPHTPDNSFMGFVSEELNDTEKRSIMQNKVNNMAVVYGKEASMWKGKEG
FLQILHRYMEVHGTVYYETQRPPEVPAYVKNHGLLPQHELQTLLRKAKLFIGFGFPYEGP
APLEAIANGCIYLQPKFHPPHSSLNHEFFRGKPTSREVSSQHPYAEQYIGRPHVMTVDYN
NSQEFDAAIRQIMSTKVEPYLPYEYTCEGMLERVHAYIQHQDFCAPEAPFPPANSSSSKP
GLSSPGSPGPQFVLLPNSSALTWAPDASAPDAWPPLSSLRLLASQEGQSCVEACQRANLV
CEPALFRFVNNKDALRGLEVQCEVVEAEVNHVFPAFSVLRRECSLQKDPLLYSCAGHSPK
YHRLCPCRDYRRGQVALCRDCL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattactggcaacatcgacggtaaaataatggttagaagatggcttgtgacgttcaaa
cctttcaggatatttgtggtggggatcggcttcttcagcctgtgttttctaatgacctcc
ctggggggccagttctcagccaagaggcttggggactcccccttcaccatccggacagaa
gtgatggggggagtggagtctcgtggggtgcttaggaagatcagtgacatgctggaggtg
atcctgaagaggatggacagcctctccaaactggacaacagaagtctcctgtatggagcg
ggactggatgccaattttcctgcaaagcaaatgcaaacgtgttcaggcctggtagagagg
atccaggctatagctcagaacgtgtccaacatggcggtcagagtggaacagatcctccag
aacagcatggccgccggcagagcagtgagagacggctcatcgggccaatgtgaggtaccc
agagacccccgctaccccgactgccctggaaaggtcgattggatgcgtgcccgctggacg
tcagacccgtgctatgccttctacggggtggacggctccgactgctcattccttatctac
ctgagcgaggtggagtggttctgcccccctctggcctggaggaaccagacctctgtctct
ctctctccctctcgctctccctccccctccctataggctgcattccgtacagacctgtca
tctctgctagaccaggttggcacgggcaaagagtcccttagcttcatgaagcgccgcatg
aggaggctggcatcacagtggggcacggccgcccagcgcctccactccaagctgcgccaa
cgctggagggaacagaagaagatcctggtgcacgtgggcttcctgacagaggagtcaggg
gacgtgttcagccccaaggttctgaagggaggtcccctgggggagatggtccagtgggcc
gacatcctcacagccctccacgtcctgggacacaacctcaagatctccatgtctgtcaag
gaactgcagggatttctcggggtgcccccaggcagagggagctgccccttgacaggacct
ctaccctttgacctcatctacacagactaccacggcatgcagcagatgaagcagcacatg
gggctttcgctcaagagacacaagtgccacatccgtgtgattgacaccttcgggacagag
ccggcctacaaccatgaggactacgccaccctgcatggctacaggaccaactggggctac
tggaacctcaactccagacagtacatgaccatgttcccccacactccagacaactcgttc
atgggctttgtgtctgaggagctgaacgacacggagaagaggagcatcatgcagaacaag
gtcaacaacatggctgtggtttacggaaaggaggccagcatgtggaagggtaaggagggt
ttcctccagatcctccacaggtacatggaggtccacgggacggtgtactacgagacccag
cgcccccccgaggtgcctgcctacgtcaaaaaccatggcctgctgccccagcacgagctg
cagacgctgctccgcaaggccaagctcttcatcgggtttggtttcccctacgaagggccc
gcccctctggaggccatagccaatgggtgcatctacctgcagcccaagttccacccaccg
cacagctcgctcaatcacgagttcttcagaggcaagcccacgtctagagaggtgtcgtcc
cagcacccgtatgcagagcagtacatcgggcggccccacgtcatgacagtagactacaac
aactcccaggagtttgacgccgccatcagacagatcatgagtaccaaggtcgagccatac
ctaccgtatgagtacacctgcgagggaatgctggagagggtacacgcctacatacagcat
caggacttctgcgcccccgaggcccccttccctccggccaactcctcctcctccaagccg
gggcttagtagtccgggtagccctgggcctcaatttgtcctgcttcccaactccagtgcc
ctaacctgggcccccgacgccagcgcccccgacgcctggccccctctcagctctctgagg
ttgctggcgtcccaggagggccagtcgtgtgtggaggcgtgccagcgtgccaacctggtc
tgtgagcccgcgctcttccgcttcgtcaataacaaggatgccctccgtgggttagaggtg
cagtgtgaggtggtggaggcggaggtcaaccacgtgttcccggccttctccgtcctacgc
cgggagtgcagcctccagaaggaccccctcctctacagctgtgccggccacagccccaag
taccaccgcctctgcccctgccgggactaccgccgcggccaggttgccctctgccgagac
tgcttatga
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