Salvelinus namaycush (lake trout): 120027419
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Entry
120027419 CDS
T07522
Symbol
hoxa1a
Name
(RefSeq) homeobox protein Hox-A1a
KO
K09301
homeobox protein HoxA/B/D1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120027419 (hoxa1a)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120027419 (hoxa1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
120027419
NCBI-ProteinID:
XP_038828276
UniProt:
A0A8U0PPL4
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All DBs
Position
32:27858780..27860729
Genome browser
AA seq
328 aa
AA seq
DB search
MSSLLDYSVMSGDGGSCSVRAFHSDHGITTFQSCAVTVNNCGADERFMPNRSSPDGIPHQ
TGSYQTPTGSLGLAYGAHPACGSGYGPQGFCATYNHYALNQEVESATGFPQCAPLMYSGN
ISSSMVPQHRQGYGGAPLGQLQYAHATYGGGHEQANLPPFSGCSNPLSPLHAAHLDSCCS
PLSSESASNAQTFDWMKVKRNPPKTGRSGEYGYGGQSNTVRTNFTTKQLTELEKEFHFNK
YLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREKECLLPTNAAVSDPRDSCPEKAAG
SEKSLSAPSTPSPASSTVSSGVDPYSSS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcttgttagattactctgtgatgagcggcgacggcgggtcctgctcagtcagg
gctttccactccgaccacggaattactacattccagtcctgcgcagtcaccgtgaacaac
tgtggggcggatgagcgcttcatgcccaataggtcttccccggatggcatccctcaccaa
acggggtcctaccagactcctactggctctctgggtttagcctatggggcccatcctgcc
tgcggctcaggctatggaccccagggcttttgtgccacctacaaccattacgcattgaac
caggaagtggagtcggccacgggtttcccccagtgcgccccattaatgtactccggcaac
atttcctcgtccatggtaccgcagcatcgccaaggttatgggggagcgcccctgggtcag
ctccagtacgctcacgccacctatggtggcgggcacgagcaggcgaacctgcctcctttc
tctgggtgctcaaacccgctgtcacccctgcacgcggcccaccttgactcgtgctgctcg
cccctgtcctccgagagcgcctccaacgcacagaccttcgattggatgaaagtgaagagg
aacccgcccaagacaggcagatcaggggagtacggctatggggggcagtccaacaccgtc
cggaccaacttcaccaccaagcaactcaccgagcttgagaaggagttccacttcaacaag
tatttgacccgcgcgcggcgcgtggagatcgcggcagcgcttcaactgaacgagactcag
gtcaaaatctggttccagaaccgcaggatgaaacagaagaagcgcgagaaggaatgcctg
ctgcccaccaatgccgcagtgtcagacccgagggatagctgcccggaaaaagcagccgga
tctgagaagtccctctccgccccctccaccccatctccagcctcttcaacagtgtcctct
ggggttgacccatactcctccagctaa
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