Salvelinus namaycush (lake trout): 120027485
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Entry
120027485 CDS
T07522
Name
(RefSeq) transcriptional repressor p66-beta-like
KO
K23194
transcriptional repressor p66
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120027485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120027485
03036 Chromosome and associated proteins [BR:
snh03036
]
120027485
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120027485
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
120027485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
Motif
Other DBs
NCBI-GeneID:
120027485
NCBI-ProteinID:
XP_038828362
UniProt:
A0A8U0PNX0
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All DBs
Position
32:complement(12936323..12975233)
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AA seq
667 aa
AA seq
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MERMSEEALRLNLLKRGLETSEEREEALAKRLKMEGHEAMERLKMLALLKRKDLAALEGA
AAVAAGSLDGSKGGPGGSHHHHHHHQSMLAGAAAAYEEKMNGRLGGHGGPSKNGKENMVD
EPVDFSARRGDLDRERHTPSPDVIILSDNEASSPRGTPHPGERLHQANLEIFKGKNGEER
QKMIKALREELRLEEARLVLLKKLRQSQIQKENVVQKVPVVQNSPSSVQPSPIHSSQGMG
KLPVRPGMHTPEPQNLRTAQGHTVIRSGANASLPPMMMSQRVIALNPSHLQGQRMPSKSG
MSRSSTGSMSNVSYQQATSQQVTASQRSGSSAIYMNLAHMQAAAAGGVAGVGMGSSGMGA
VSPSTMSSGTGGGGSSGVSSLADQASSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLP
SAANSEFIYMVGLEEVVQSVIDSQGKLRGALSRMEPFFCAQCRIDFTPHWKQEKGGRILC
EQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSPSTAPTVPNVGKAET
MIRHHALRQAPQPQASMQRGLSSSARGVLSNFAQASQLSVASGLLGMTGKQRCGGGGGGG
TSGGGGSSRIQHDGRRQIYNIPGLNIAYLNQGGVGANKGSSLADRQREYLLDMIPPRSIS
QSINGQK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatgtctgaggaggctctgaggctgaacctgctcaagcggggcctggagacg
tccgaggagcgtgaagaagccctggccaagcgcctcaagatggagggccacgaggctatg
gagcgcctcaagatgctggccttgctcaagcgcaaggacctggccgcgttggaaggtgcg
gcggcggtggctgccgggtccctggacggcagcaaaggggggccgggagggagccaccac
caccaccaccaccaccagagtatgctggcaggcgcggcggctgcctatgaggagaagatg
aacgggaggctggggggccacggaggccccagtaagaatggcaaggagaacatggtggac
gaaccagtggacttcagcgccagaagaggcgacttggaccgtgagcgacacactccgtcc
ccggacgtgatcatcctgtcagacaacgaggcatccagtcccagaggaacgccccatccc
ggagagaggctgcaccaggccaacctggagatcttcaaggggaagaatggcgaggagcga
cagaagatgatcaaggctctgagggaagagctgcgtctggaagaggcccgtctggtgctg
ctcaagaagcttcggcagagccagatccagaaggagaacgttgtgcagaaggtacctgtg
gtacagaatagcccctcttcggtgcagccgtcccccatccacagttcacagggcatggga
aagctgccggtgcgccctggcatgcacaccccggagccccagaacctccgcactgcacag
ggtcacacagtcatcaggtcgggggccaacgcctccctgcccccgatgatgatgtcacag
agggtcatcgccctcaacccgtcccatctgcagggtcagagaatgccctccaagtctggc
atgagccgctccagcacgggcagcatgagcaacgtcagctaccagcaggccactagccag
caggtgacggcgtcccagcgttcgggctcctctgcaatctacatgaacttggcccacatg
caggcggcggcggctggtggcgtggccggtgtggggatgggcagcagcggaatgggcgct
gttagcccttccaccatgtcgagcggcacaggtggcggcggcagctccggcgtgagctcc
ctggcggaccaggccagcagccaggcggcagccaagctggccttgcgcaaacagctggag
aagaccctgctggagatcccgccgcccaagccaccagccccactcctgcacttcctgccg
tcggcggccaacagcgagttcatctacatggtgggcctggaggaggtggtgcagagcgtc
atcgacagccagggtaagctgcggggggcgctgtcacgcatggagcccttcttctgcgcc
cagtgcaggatcgacttcaccccacactggaagcaggagaaaggcgggcgtatcctctgc
gagcagtgcatgacgtccaatcagaagaaggccctgaaggcggagcacaccaataggctg
aagaacgcattcgtcaaggccctgcagcaggagcaggagattgagcaaaggctccagcag
caggcagccctctcccccagcacggctccgactgttcccaacgtcggcaaggccgagacc
atgatccgacatcacgccctgcgtcaggctccccagcctcaggcctccatgcagcggggt
ctctccagctcggcgaggggcgtcctctccaacttcgcccaggcctcccagctctccgtg
gccagcggcctgctggggatgacggggaagcagcgctgcggaggaggaggtggtggcggg
actagtggcggtggtggcagcagtcggatccagcatgatggccgtcgccagatctacaac
atccccgggttgaacattgcctacctgaaccaaggaggggtcggggccaacaaaggctcc
agcttagcggaccgccagagggagtacctgttggacatgatcccgccgcgctccatatca
cagtccatcaacggacagaaatga
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