Salvelinus namaycush (lake trout): 120027594
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Entry
120027594 CDS
T07522
Name
(RefSeq) ubiquitin-protein ligase E3C-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120027594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120027594
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120027594
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120027594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
120027594
NCBI-ProteinID:
XP_038828507
UniProt:
A0A8U0PP14
LinkDB
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Position
Sna33:5518156..5555780
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AA seq
1089 aa
AA seq
DB search
MSFSFEGDFKTRPKVSLGGVSKKEEKASLLHRTQEERRKREDERRRLKNAIIIQSYIRGY
HDRKQQYAIQRGNFDRCVCQAQSEGGPPISDAASLSLLTRQLLFFYRQSEDSQRLIWICQ
NLVKHNGQFVKLLAGPERQTCVFQIKRVLGFCCRLLQTCKDDSLNVAVPMRMLEIYSSER
TYLPVLQDVNCVASLIEQILHYMVQKGYYRSLYILVNHKLPSSLEYSDAPSGAHAIPLAG
TLLEHTLKPLHFTYSSCTTGARQFVFAAFTEEFISAPFTEQIFHFFIPALSDPRLHFPFE
AFLGSLQATVVSSAAAQKQAPWLFYFVLSAGETCLGSLSEDGLQLYLRALQTLLPLLPVS
ESTSRPEVISDSEDEEDTDIQAPSTQHDSYRISVQLITEECVHKLDTKQQTNALLNLVWR
DSASEEVFTMMASICHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWHLIQSMTTKMITGS
MVPLLQVISRGSPMSLEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGYPMEGHGHSNTSM
MPFTLSELVTLSRLLRDACLGIIKLAYPETKTEHREEYMAAFRSVGVKTNTEVQQRIQAE
QKRWVQLFKVITNLVKMVKARDIRRPFCPAGHWLAEEVNIRADKVTQLYVPSARHVWRTR
RMGRIGPLQSTLDVGMEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLIYADKRDVQ
GDGPFLDGINVTIRRNYIYEDAYDKLSPENEADLKKRIRVHLLNAHGLDEAGIDGGGIFR
EFLNELLKSGFNPNQGFFKTTNEGLLYPSPTAQMLVGDSFARHYYFLGRILGKALYENML
VELPFASFFLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEDDVEDLGLNFTIVNNDL
GEAQVVELKPGGKDIPVSTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRM
FDQQEIQVLISGAHVPICLDDLKTFTNYSGGYTATHPVITIFWEVVESFTDEEKRKLLKF
VTSCSRPPLLGFKELYPAFCIHNGGNDLERLPTASTCMNLLKLPEFCDQHLMRNKLLYAI
ESSAGFELS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagttttgagggagatttcaaaacaagacccaaggtgtctcttgggggagtg
agtaaaaaggaggaaaaagcatctctcctacaccggacacaagaggaaaggagaaaaaga
gaggatgaaagacgaagattgaagaatgcaattatcattcaatcctatatacgaggatac
catgaccgaaaacagcaatatgccatccagaggggcaactttgaccgctgcgtctgccag
gcacagtcagaaggtggaccgccaatctccgacgctgccagtctcagtctcttaacaagg
caactgctatttttctacagacagagtgaggactctcagagattgatatggatttgtcag
aacctagtgaaacacaatgggcagtttgtgaagctgctggcggggcccgaaagacagacg
tgtgtgtttcagatcaagagggtcctgggcttctgctgcagacttctacaaacctgcaag
gatgacagtttgaatgttgccgttcccatgaggatgctggagatctattcctcagagaga
acctatctccctgtccttcaagacgttaattgtgtggcatcgttaatcgagcagattttg
cactatatggtacagaaaggatactacaggtcgctttatattctagtgaatcacaagctc
ccttccagtctggagtacagtgatgctccctctggagcacacgctatccccttggcaggc
acactgctggagcacacgctgaagcccctgcactttacctattcctcctgcacaacaggc
gcaaggcagtttgtgtttgcagccttcacggaggagttcatctcggcgccgttcacggag
cagatctttcacttctttattccggcgctgtccgacccgcgcctccacttcccctttgag
gccttcctgggctccctgcaggccactgtagtctcctccgcagcggcgcagaaacaggcg
ccgtggctcttctactttgtcctctcagccggggagacgtgcctgggttccctgtcagag
gatggccttcagctatacctgcgtgctctgcagaccctcctacccctccttcccgtgtca
gagagcaccagcaggccggaggtcattagtgactctgaggacgaggaggacaccgacatc
caggctccgtccacacagcacgacagttatcggatatcggtgcagctgatcacggaggag
tgcgtccacaagctggacaccaagcagcagaccaacgcgctgctcaacctggtgtggagg
gactcggccagcgaagaggtcttcaccatgatggcctccatttgccacacgctcatggtg
cagcaccgcatgatggtgcctaaagtcaggcttctgtacagtttagcgttcaacgcacgt
ttcctgagacatctctggcacctgatacagtccatgactaccaaaatgattacagggtcc
atggttccgctgctgcaggtcatctcccgggggtctcccatgtctctggaagactccaat
cgcatcattcccctcttctacctcttcagttccctcttcagtcactcgctcatctctgtg
cacgacagcgagttctttggctaccccatggaaggtcatggccacagcaatacgtccatg
atgccgttcacattgtccgagctggtgaccctgtctcggttactaagggacgcttgtctg
ggcattatcaagctggcctacccagagaccaagacggagcaccgcgaggagtacatggct
gccttccgcagcgtgggggtcaagacaaacacagaggtgcagcagcgcatccaggccgag
cagaaacgttgggtccagctcttcaaggtcatcactaacttggtaaagatggtgaaggct
cgtgacatcagacgaccattctgtccagcaggccattggcttgctgaagaggtcaacatc
cgagcagataaggtgacccagttgtacgtcccttcagccagacacgtgtggaggacgcgg
aggatgggacgcatcgggcccctgcagtccacactggatgtggggatggagcctccacag
ctgtctgtgtctgaggagagacacttggccatcctgactgagctgcccttcgtcgtgccc
tttgaggagcgagtcaagatcttccagagactgatctacgcggacaagcgggacgtccag
ggagacgggccgtttctggacgggatcaacgtcaccatcagacggaactacatctacgag
gacgcctacgacaagctctccccagaaaacgaggcggacctgaagaaacgtatccgggtg
cacctgctcaacgcccacggcctggacgaggcgggcatcgatggagggggcatcttccgt
gaattcctcaacgagctgctcaagtcgggcttcaaccccaaccaggggttcttcaagacc
accaacgagggccttctctaccccagccccaccgcccagatgctggtgggggactccttc
gccagacactactacttcctgggacggatactggggaaggccctgtatgagaacatgctg
gtggagctgccatttgccagtttcttcctgtcgaagctgctgggaaccagtgcagatgtg
gacatccaccacctggcctcgctggaccccgagatgtaccgcaacctgctcttcctcaag
agctacgaggacgatgtggaggacctgggactcaacttcaccatcgtcaacaatgacctg
ggagaggcacaggtggttgagctgaagccgggagggaaggacatccctgtgtccacggcc
aacaggatagcatacatccatttagtggctgattaccgactcaacaaacagatcaggccc
cactgcctggccttcagacagggcctggccaacgtggtaaacctggagtggctgcgcatg
tttgaccagcaggagatccaggttttgatatctggagctcatgtgcccatttgccttgac
gacctgaagacgtttacaaactactcaggtggttacactgccacccaccctgtcattacc
atcttctgggaggtggtagagagcttcaccgatgaagagaaacgcaagctgctcaagttt
gtcaccagttgctcgcggcctcctctcctgggcttcaaggaactgtacccagctttctgc
atacataacggggggaatgacctagagcgcctgcccacagcttccacctgtatgaacctg
cttaagctgcccgagttctgcgaccagcacctgatgaggaacaagcttctgtacgccatt
gagtcctccgcaggcttcgagctcagctga
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