Salvelinus namaycush (lake trout): 120027596
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Entry
120027596 CDS
T07522
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120027596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120027596
04147 Exosome [BR:
snh04147
]
120027596
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
120027596
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120027596
Exosomal proteins of other body fluids (saliva and urine)
120027596
Exosomal proteins of colorectal cancer cells
120027596
Exosomal proteins of melanoma cells
120027596
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC39
TPR_MLP1_2
AIF-1
Nuf2_DHR10-like
DUF2461
YabA
CENP-F_leu_zip
FKBP15
RelA_AH_RIS
ATG16
Motif
Other DBs
NCBI-GeneID:
120027596
NCBI-ProteinID:
XP_038828513
UniProt:
A0A8U0TU82
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All DBs
Position
2:complement(65401556..65405605)
Genome browser
AA seq
490 aa
AA seq
DB search
MSFSRSSMSYSSSGGGGGGGTMSMRSGGGGGMGMGSSRFSSMGGGGGGGGRVTAMRAGSV
YGGAGGSGVRISSSSFGSGGGGGGGGYGFGMGGGGGGGGGGGGFSFGLGRGCGTDSGADI
NVSANEKATMQNLNDRLSTYLEKVRMLEAANAELELKIRQFMESKASPSARDYSRFYAII
ADLQDKIQAATRVNGGIYLSIDNAKLAADDFRNKYENELAMRQSVEADIAGLKRMLDEMT
MARSDLEMQIEGLKEELIYLKKNHEEELLAMRTQMTGQINVEVDAAPQEDLTRVMAEIRE
QYEAVSAKNQRDLESWFQTKTETLNQEVASSTEVLQTSKSEISEIRRTLQGLEIELQSQL
SMKGSLENTLAETEGRYSMQLGRLQNQVTSLEEQLMSLRSDMERQGQEYKMLLDIKTRLE
MEIAEYRRLLDGEASGLSSSKSGHGSSSSHVSSSSSGPSSSTSTTRKVVIVTEEIVDGKV
VSTSQTKHTT
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagatctagcatgtcctacagcagcagcggcggtggaggcggaggtggc
accatgtccatgaggtctggaggtggaggtggaatgggtatgggctcctcccgcttctcc
tcgatgggtggtggtggcggtggaggaggccgcgtcactgccatgagggccggcagtgtg
tatggaggtgcaggaggctctggggtgcgcatctctagctcctcgttcggttccggcggc
ggaggtggtggtggcggttatggtttcggaatgggagggggtggcggcggcggtggcggc
ggtggcggttttagttttggcttgggacggggttgtggtactgacagtggagccgacatt
aatgtgtcggccaacgagaaggccacaatgcagaacctgaacgaccgcctgtccacctac
ttggagaaggtgcgcatgctagaggcggccaacgccgagctggagctgaagatccgtcag
ttcatggagagcaaggcgtcccccagcgctcgcgactactctcgcttctacgctattatc
gccgacctgcaggacaagatccaggctgcaactcgcgtaaacggaggtatctatctcagc
atcgacaacgcaaagctcgctgcagacgacttcagaaacaagtatgagaacgagctggcc
atgcgtcagtcagtggaggctgacatcgccgggctgaagaggatgctggacgagatgacc
atggccagatctgacctggagatgcagatcgaggggctgaaggaggagctcatctatctc
aagaagaaccatgaggaggagcttctggccatgaggacgcagatgactggacaaatcaac
gtggaagtggacgcagcaccacaggaggacctgaccagagtcatggctgagattcgtgag
cagtatgaggccgttagtgccaagaaccagcgtgacctggagtcctggttccagaccaag
acagagacgttgaaccaggaggtggcgtccagcacagaggttctccagacctccaagtca
gagatttcggaaatccgtcgcacactgcagggcctggaaattgaactgcagtcacagctc
agcatgaaaggctccctggagaacacgctggcggagacggagggccgttactccatgcag
ctgggacgcctccagaaccaagtgaccagtctggaagaacagctaatgtctctccgcagt
gacatggaacgccagggccaggagtacaagatgctgctggacatcaagacacgcctggag
atggagatcgctgagtacaggaggctgctggacggagaggctagcggcctcagctcctcg
aaatccggccacggctcctccagctcgcacgtcagctcctccagctccggccccagctcc
tccacctccaccacacgcaaagtggtgatcgtcacagaggaaatagtggatggcaaggtt
gtctccacaagtcaaaccaaacataccacttaa
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