Salvelinus namaycush (lake trout): 120027630
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Entry
120027630 CDS
T07522
Name
(RefSeq) POU domain, class 6, transcription factor 2-like
KO
K09368
POU domain transcription factor, class 6
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120027630
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120027630
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GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HOCHOB
FtsX_ECD
DUF755
Motif
Other DBs
NCBI-GeneID:
120027630
NCBI-ProteinID:
XP_038828560
UniProt:
A0A8U0TUJ4
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Position
Sna33:complement(2397371..2521429)
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AA seq
769 aa
AA seq
DB search
MITGQLSKPLLSLRSEMSAAELRAEDKAATPDSKLNDEPLLLSSEATGREDTPNKLYGAR
DGSVQSDASSSPSEQCHLGQSHPAYPVGPQSLLVAQQLAGGSPGLNQPILIPFNTGGHLG
GQQGLVLSLPTANIQGLVAAAAAQGIMTLPLQNLQATSSLNSQLQHLQQLQQIQQHHHQQ
QQHHHQQQQHHHQQHQHSHSHAHNQLSSRGRMTPPSLQQSSVSVPSPGSASSSTTSMTGS
GQPPQSSPLRQNQSPARSLPSPVTPPMPLQLPAVCLASPLQSSAFLSSVPCTPTSQDRGA
SDPQWAPRHKLLSKCSTPLRRPVPLRGTILLPRLHGLLHQVTLMDNGLLHQATLMDNGLL
HQVTLMVNGLLHQLNPLASQAAVAAAMGSIAGSQVFGNALSNLQAGVTGQLVTNAQGQII
GTIPLMPNSGGPSSQSGGGNPALQVQPITPQLLTNTQGQIIATVIGNQILPVINTQGITL
SPIKPGQQLPQAQQVQTGPVSSQPNLLHMPHSQSPLRQISSSSSSSSSSSSLSVGQLVSN
PQMAPSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSAAEGPAYSQSAICRHTIL
RSHFFLPQEAQENTIGSSLTGKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAEAR
HRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHFEKNTHPSGQEMTEIAEKLNYDR
EVVRVWFCNKRQALKNTIKRLKQPGDLDLDLGPTAPMDPLSDSLDEIPK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgattacagggcagttgagcaagccgctgctctccctgcgcagcgagatgagcgcggca
gaactccgggcagaggacaaagcggccaccccagacagcaagctcaatgacgagcccctg
ctcctgtcctccgaggccacgggcagagaggacactcccaacaagctctatggggcccgt
gatggctctgtccagtctgatgccagcagcagcccgtcagaacagtgtcatctgggtcag
tctcacccagcctacccggtaggaccacagtctctgctggtggcccagcagctagccgga
gggtcgccaggcctgaaccagcccatcctcatccccttcaacacgggcggccacctggga
ggccagcagggtcttgtgctttccctgcccaccgccaacatccagggcctggtggctgca
gcagccgcacagggcatcatgacgcttcccctacagaacctgcaagctacctcatccctg
aactcccagcttcagcacctgcagcagctccaacagatacaacagcaccaccatcagcaa
caacagcaccaccatcagcaacaacagcaccaccatcagcagcatcaacactcccacagc
cacgcccacaaccagctgtcatcgcggggtcgcatgaccccgcccagccttcagcagtcc
tctgtctcggtcccctcccctggctccgcctcctcctccaccacctccatgactggctct
ggccaaccgccacagtcttcgcccctccggcaaaaccaatcgccggcccgcagcctaccc
tcgcccgtcaccccgcccatgccactgcagcttcctgccgtctgcctggcctcccccctg
cagtcctcagctttcctctcctccgtcccttgcaccccgacatcacaggaccgcggggca
tcagacccacaatgggctcccagacacaagctgctgtctaagtgctccactccactgagg
aggccagtccccctgcggggcacgattctcctgcctagattgcatgggttactgcaccag
gtgaccctcatggacaacgggttactgcaccaggcgaccctcatggacaacgggttactg
caccaggtgaccctcatggtcaacgggttactgcaccagttgaaccctctggccagccag
gcagcggtggctgcagctatgggctccatcgccgggtcccaggtctttggcaacgccctc
tccaacctgcaagctggagtcacggggcagctggtcaccaatgcacaaggacagataatt
ggaacgatcccactgatgcccaactctggggggccctcgagccaatcagggggtggaaac
cctgcgctgcaggtccagccaattacacctcagcttctgaccaacacccagggccagatc
atcgccacggtgatcggcaatcagatcctgcctgtcatcaacacccagggaatcacgctg
tcaccaatcaagcctggacagcagctgcctcaggctcagcaggttcagacaggcccagtg
tcatctcagcccaacctgctccacatgccccacagccagagtcctctccgccagatctct
tcctcctcatcatcatcatcttcctcctcctctctcagcgtgggtcagctggtcagcaac
ccccagatggcacccagcgaggtggatggggtcaacctggaggagattcgggagtttgcc
aaagcattcaagatccgtcgcttgtcccttggcctgacccagactcaggtgggacaggcg
ctcagcgcggccgagggcccggcctatagtcagtctgccatctgcagacacaccatcctg
agaagccactttttcctaccacaggaagcccaagagaacactataggtagcagtctgaca
ggcaaactgaaccctggccttttatatcctgccaggtttgagaagttggacatcacccca
aaaagcgcccagaagattaagcccgttctggagcgctggatggccgaggccgaggcccgc
caccggtccggcatgcagaacctgaccgagtttattggcagcgagccctccaaaaaacgc
aagcggaggacctctttcaccccgcaagcgctggagatcctaaacagccacttcgagaag
aacacgcacccctctggacaggaaatgacagagatagccgagaaactgaactatgaccgc
gaggtggtccgcgtctggttctgcaacaagaggcaagcgttgaagaacacaataaagcgg
ttgaaacagcccggtgacctggacctggacctcggcccgaccgcgcccatggaccctctc
tctgattctctggatgagatcccaaaatga
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