Salvelinus namaycush (lake trout): 120027636
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Entry
120027636 CDS
T07522
Name
(RefSeq) M-protein, striated muscle-like
KO
K24495
myomesin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120027636
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120027636
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120027636
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Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
V-set
Ig_CD22
C2-set_3
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
120027636
NCBI-ProteinID:
XP_038828562
UniProt:
A0A8U0PQN5
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Position
Sna33:2855035..2897542
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AA seq
1463 aa
AA seq
DB search
MSGSIPFYQKQHRHYDRGYRSKEVESAVSQYQSSSSSYATHSRASASLSASRGLSASYSG
LEESRLSPIPKRAKPTYLAMDKENQIIGYVVPIFRGSQEYASGLSDTEEARMKESAGYMA
RRNLFSSGLEMERTEQTSRKVSMRQSAEHISLSKKIYENEEYHKCMNEDSLMHAPEFVIK
PRSHTVWEKQCVRLHCTVSGWPDPRVVWYKNNVTIDPMARPGKYKLQSSYNVHSLEIDRC
DFDDTAQYRVSAMNSRGELSTFASIVVKRFKGEVDETLPMPRHGIVSEYGITFETHIVDG
FGVSFGREGETMSLGAMVIISPNLARYQPEVQWYRDDVLLQPSKWCQMHWSGDKATLTLT
HLNKEDEGLYTLRITTKTKYETYSAYVFVRDADAEVEGAPGAPLDVTCQDANKDYVIVTW
KQPAVDGGNSILGYFVDRCEVGTTHWSQCNDTPIKFARFPVTGLVEGRSYTFRVRAVNKS
GMSRPSRTSEVVAAMDPADRARMRGTSAPWTGQIIVTEEEPAEGVVPGRPKELEVAEATK
NYVVLSWKPPGERGHEGIMYYVEKCVSGTDSWQRVNTEIPVKSPRYALFDLAEGKAYRFR
VRCCNSAGVGEPSEATEATTVGDKLDIPSAPGRVVPTRNTDTSVVVSWEASRNAKELVGY
YIEASIVGSKKFEPCNNKPVKTTRFVCHGLVTGESYVFRVKALNAAGLSECSQESEAIEV
KAAIASPTPPYGISILECVRDSMVLAWKQPTFIGGADITGYFVDYREVINGVPGKWHEAN
VKAVSDRAYRVSDLKENRKYQFQVRAANMAGVGIPSLPSETFICEEWTIAVPGPPHDLQV
TEVRANTLVLLFKPPVYQGRDPVNGFYIDIKEADAEEEAWRGVNEKAISTNYMKIKVLKE
GETYVFRVRAQNKAGVGKASEPTEPVLAETKPGTTEIVVDIDDDGVISMNFACSNLTPDS
KFVWSKNYKEITDETRITVVTSGEKSKAIFNMPAEDDIGIYSCAVTHTNGESSSYTLSAE
ELKKLLEISHDHKFPIIPLKTELAVELQEKGRVRFWLQAEKISANGKIQYVFNDNTLSQG
EKYKMNFNKDTGVIEMIMESLLQEDEGTFTFQLQDGKATNQSSLVLIGEVFKQLQKESEF
MCKEWHRKQGPHFVEYLSYEVTPECCVFLKCKVGNIKKETVALWYKDGREVKGDGNLTFT
EGMLNLEIAQISKKDAGVYEIVMKDDRGKDTSTLNLTEQGFRDLMNEMFSHIANSSTALK
IQSTEEGIRLYSFVSYYNEALQVTWHHKDSAIAFTDRIKSGVVGEQLWLQITEPTEKDKG
KYAIEFHDGKGGLKRTVELAGQAFDDAYAEFQRLKAAAIAERNRARVAGGLPDVVTIQEF
KALNLTCNISGDPIPEVVWLKNEREIVSDDHYIMKFESGKYASFTITTVNTTDSGKYSIL
VKNKYGTESADFTISVFSPDSKK
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatccattcctttctaccagaaacagcaccgccactatgaccgtggctaccgc
agcaaggaggtggagtcggctgttagccagtaccagtcgagcagcagcagctatgccacc
cacagcagagccagtgccagtctcagtgccagcaggggacttagtgcatcgtactctggg
ctggaggagagcagactgagcccaatccccaagagagccaagcccacctacctggctatg
gacaaagagaaccagatcatcggctatgtagtgcccatcttcaggggcagtcaggagtat
gccagtgggctttcagatacggaggaggcccggatgaaggagagtgctggatacatggct
cggaggaatctgttctccagtgggttagagatggagaggacggagcagacgtctaggaag
gtgtccatgcgccaatcagccgagcacatctccctgagcaagaagatctatgagaacgag
gagtaccacaagtgtatgaatgaggatagcctgatgcatgccccggagtttgtgattaag
cctcgctctcacacggtgtgggagaagcaatgcgtcaggctgcactgcaccgtctctgga
tggcctgacccacgggttgtctggtacaaaaacaatgtgacaatcgatccaatggcccgc
cccggcaagtataagctacaaagcagctacaacgtgcattcactggagattgacagatgt
gattttgatgatactgcacagtatcgtgtttctgccatgaacagcaggggagaactctct
acctttgcctctatcgttgttaagagattcaaaggagaggtagatgagactctccccatg
cccagacatggcatcgtctctgagtatggcatcaccttcgagacccacatcgtggacggg
tttggcgtgtcattcggacgggagggtgagaccatgagcctgggtgccatggtcatcatt
tcccccaacctggcacgctaccagcccgaggtgcagtggtacagagacgatgttcttctg
cagccctccaagtggtgtcagatgcactggagtggagacaaggccacgctgaccctgaca
cacctgaacaaggaggacgaggggctctacaccctgcgcattaccaccaagactaaatat
gagacttattctgcttacgtctttgtcagagatgccgatgcggaggtggagggagcccct
ggtgccccactggatgtgacgtgtcaggacgccaataaggattacgtcatcgtgacctgg
aagcagccggctgtggacggtggcaactccatcctgggctactttgtggacaggtgtgag
gttggtaccacccactggagccagtgtaatgacacccccatcaagtttgcccgtttccct
gtgacagggttggtggaggggcgctcctacaccttccgtgtgcgcgctgtcaacaagtct
ggcatgagtcggccatcccgcacctctgaggtggtggcagctatggatcctgccgaccgc
gcacgtatgagaggtacctctgcaccctggaccggccagatcattgtcactgaggaggag
cctgcagagggtgtagtccctggcagacccaaagaactggaggtcgctgaggccaccaag
aactatgtggttctgagctggaaaccccctggagagcgaggtcacgagggcatcatgtac
tatgtggagaagtgtgtgtctggtacagacagctggcagagggtgaacacagagatcccg
gtgaagtctcctcgctacgccctgtttgacctggctgaagggaaggcctacagattccgt
gtgcgctgctgcaactccgctggtgtgggcgagccttcagaagccaccgaggccaccact
gtcggggacaagctggatatcccatctgccccaggccgtgtagttcccaccaggaacact
gacacatccgtggtggtatcctgggaggcttccaggaatgcaaaggagctggtgggatac
tacatcgaggccagcatcgtgggcagcaaaaagtttgagccctgcaacaacaagcctgtc
aaaaccaccaggtttgtctgccacggtctggtgacaggagagagctacgtgttcagagtg
aaggcactgaacgccgctgggctcagcgagtgttctcaggagtctgaggctattgaggtg
aaggctgctattgcgtcccctactccaccctatggcatcagcattctggagtgcgtgcgg
gactctatggtgttggcctggaagcagcccaccttcatcggaggtgctgacatcaccggc
tacttcgtggactaccgtgaggtcatcaatggggtgccagggaagtggcacgaggccaat
gtgaaggctgttagcgaccgagcgtaccgcgtgtccgacttgaaggagaacaggaagtac
cagttccaagtgcgcgctgccaacatggcaggcgtgggcatcccgtctctgcccagtgag
acgtttatctgtgaggagtggaccattgctgtgccaggacctccccatgatctgcaggtg
acagaggtgcgcgccaacactctggtgttgctctttaagccaccagtgtaccagggccgt
gacccagtcaacggattctacattgacattaaggaggctgatgctgaggaggaggcctgg
agaggagtcaatgagaaggctatctccactaactacatgaagattaaggttctaaaggag
ggggagacctatgtgttccgtgtgcgtgctcagaacaaggcaggtgtaggaaaggcctct
gagcccacagaaccagtcctggctgaaaccaaaccaggcactacagagattgttgtggac
attgatgatgatggagtgatctccatgaactttgcctgctcaaacctaactccagactcc
aaattcgtgtggtccaagaactacaaagagatcactgacgaaacccgcattactgtggtg
accagtggggagaagtccaaggccatctttaacatgcctgctgaggatgacatcggcatt
tactcttgtgctgtcacccacaccaatggcgaatcctccagctacaccctctcagcagag
gagttgaaaaaactgctggagatcagccatgaccacaaattccccattattcccttgaag
accgagctggctgtggagctgcaggagaagggcagagttcgcttctggctgcaggctgag
aagatctctgctaatggcaaaatacaatatgtgtttaacgacaacaccctctcccaggga
gagaaatacaagatgaactttaacaaggacacgggtgtgattgagatgatcatggagtct
ctgctccaagaggacgagggaaccttcaccttccagctgcaggatggcaaagccaccaac
cagtccagcctggtgctgatcggagaagtgttcaaacagctgcagaaggagtctgagttc
atgtgcaaagagtggcacagaaagcaaggtcctcattttgttgagtacttgagttacgaa
gtgaccccagaatgctgtgttttcctgaagtgcaaggttggaaacataaagaaggagacc
gttgcattgtggtacaaggatgggcgggaggtcaagggagacgggaatctcaccttcaca
gagggaatgctcaacctggagattgctcagatctcaaagaaggatgccggtgtctatgag
attgttatgaaggatgacagagggaaggacacatctacgttgaatctgacagaacaaggt
ttcagagacttgatgaatgaaatgttcagtcacatcgccaactcctccaccgcactgaag
atccagagcacagaggagggcatcagattgtactcctttgtcagctactacaacgaagcg
ctccaggtcacctggcaccacaaggattcagcgatagccttcacagaccgcattaagagt
ggtgtggtaggagagcagctgtggctacagatcacagagcccacagagaaagacaagggc
aaatatgccattgagttccatgatgggaagggcggtctgaagaggactgtggagttggcc
ggccaggcatttgatgatgcatatgctgagttccagaggctcaaagcggccgcaattgca
gagagaaatcgtgctcgtgtggcgggaggcctgcctgatgttgtcaccatacaggagttc
aaggccctgaacctgacctgtaacatttcaggcgaccccatacctgaggtcgtctggctg
aagaacgagagggagattgtgtcggacgaccactacatcatgaagttcgagtcgggcaag
tatgccagcttcaccatcaccacggtgaacacgacagactcgggcaagtacagcatcctg
gtgaagaacaagtacggcacagagagcgcagacttcaccataagtgtcttcagccccgac
agcaagaaataa
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