Salvelinus namaycush (lake trout): 120027688
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Entry
120027688 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120027688
04082 Neuroactive ligand signaling
120027688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120027688
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120027688
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
HTH_25
Motif
Other DBs
NCBI-GeneID:
120027688
NCBI-ProteinID:
XP_038828608
UniProt:
A0A8U0PPX2
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Position
Sna33:complement(21327059..21336051)
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AA seq
475 aa
AA seq
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MNAVLLAVKWLCLVWAVTWPVTMVTGIRNPGRRRHKDVYVGEHSKNKHRGRIDHKLTRQD
STKSLLIKTEQLLRIEEHDFAMRPGFGGAAIPVGIDVQVESIDSISEVNMDFTMTLYLRH
YWKDERLAFPSRSNVSRTFDGRLVKKMWVPDVFFVHSKRSFIHDTTMENIMIRVYPDGSI
LYSVRITVTALCSMDFSSFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEMVLSQ
FFIKKFHPSSGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVLLSWVSFWIDR
RAVPARVSLGITTVLTMSTIITGVSSSMPQVSYVKAVDIYLWTSFLFVFLSVIEYAAVNY
CSTLEEMRRLKRGKLPTSYNASKAMAFDGCFHDSDIALTPFPRLPTSMTSNHHRTPLQNP
EDPPTEGTRLRRQRSVQENVDLLLSNSYLIDSYSRMAFPLSYLLFNTIYWSMYSS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgtccttctggccgtaaagtggctgtgcttggtctgggccgtgacgtggcct
gtaacaatggtgacagggatccgtaacccgggacgacggaggcacaaagacgtttacgtg
ggggagcacagcaagaacaaacacagagggcgtatagaccataaactgacgaggcaggac
agcaccaagtctctactcattaagactgaacagctgctgaggatcgaggagcacgacttc
gctatgagacctggctttggaggtgcagccatccctgtaggcattgatgttcaggtggag
agcatcgacagcatttcagaggtcaacatggacttcaccatgactctgtacctgcgccac
tactggaaggatgagcggctggcgtttccatctcgtagcaacgtgagcaggacatttgat
gggcgtctggtgaagaagatgtgggttcctgacgtgttcttcgtccactccaagaggtcc
ttcatccatgacaccaccatggagaacatcatgatcagggtctatcctgacggaagcata
ctctacagcgtcaggatcacagtgactgctctttgctccatggacttcagcagcttccct
ctggacacacagaactgttcactggaactagagagctatgcgtataatgagaatgatcta
atgttatattggaagaatggcaacgactctctgaggacagatgagatggttctgtctcag
ttcttcatcaagaagttccacccttccagtgggctggccttctacagcagcacaggttgg
tataacaggttgtatataaacttcatcctgaggagacatatcttcttcttcatgctgcag
acatatttccccaccatgctgatggttctgctgtcctgggtctccttctggattgacagg
agggctgtgcctgcacgtgtctccctaggtatcactacagtactgaccatgtccaccatc
atcactggtgtgtcctcctctatgccacaggtgtcctatgtgaaggcagtggacatctac
ctgtggaccagcttcctgtttgtgttcctgtcagtgatagaatatgctgctgtcaactac
tgctctacgctggaggaaatgagacgactgaagagaggaaagctcccaacctcgtacaac
gccagcaaagccatggccttcgacggctgtttccatgacagtgacattgcgctgaccccg
ttcccccgtctgccaacctccatgacctccaaccatcacagaactccactccagaaccct
gaggacccccccaccgaggggacacgtctccgccggcaacggtcggtgcaagagaacgtg
gatctgctacttagcaacagctacttgatcgactcgtactcccgcatggccttccctctg
tcctacctcctattcaataccatctactggagtatgtactcctcctga
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