Salvelinus namaycush (lake trout): 120027721
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Entry
120027721 CDS
T07522
Name
(RefSeq) homeobox protein MSH-C-like
KO
K09341
homeobox protein MSX
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120027721
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
120027721
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
120027721
NCBI-ProteinID:
XP_038828642
UniProt:
A0A8U0PPA3
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Position
Sna2:complement(67695377..67697457)
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AA seq
283 aa
AA seq
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MAPYPFQMNPVGLPGSPSHEIKLHQKEVSDTECEELQPKDMTTDKGYKSKTSSLPFSVES
LISKKTTCRTYYSSPSSDSGLVQPKPVAAAVQITEQFSPRTFYVESKVSPESSQSVSDCQ
NDDNQEFCEKDQSTWFQTSSFSTPPRSLSPPPCPLRKHKNNRKPRTPFTTSQLLALERKF
RQKQYLSIAERAEFSNSLNLTETQVKIWFQNRRAKAKRLQEAELEKYKLASKPMLPAFAL
PFPLGAHMGSPSLYGHSNAYPRPTLPVPGLFGGPVTYGMYYLS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccccgtacccctttcagatgaatcccgttggcctaccggggtctccgtcccacgag
attaaactccaccagaaagaagtgtcggatacggagtgtgaggaacttcaacccaaagat
atgacaaccgacaaaggatacaaaagtaagacgagcagtcttccattcagcgtcgaatca
ttgatttccaagaaaacaacctgcaggacttactattcttctccctcctcggattcgggt
ctcgttcaaccgaagcctgtggcggcggcggtgcagatcaccgaacagttttctccaagg
actttttacgttgagagtaaagtttccccggaaagctcgcagagcgtgtcggactgtcag
aatgacgacaatcaagaattttgtgagaaagaccagagcacttggttccagacttcatct
ttctcgactccccctcgaagcttaagtccacctccatgtcctttaaggaaacataaaaac
aaccgaaaacctcgaacgcccttcactacctcccagctgctcgctctggaaaggaagttc
cgacaaaagcagtacctctccattgcagagcgagccgaattctccaactccctcaatttg
accgagacccaggtcaaaatctggttccaaaacagaagggctaaagccaagagacttcag
gaggccgagttggaaaagtacaaactggcgtcgaaacccatgctacctgcctttgctctg
ccattccccctgggagcgcacatgggctctccatctctctacggacattctaacgcctac
cccaggcccactttacctgttccgggactcttcggtggacctgtcacctatggaatgtat
tatttgtcttga
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