Salvelinus namaycush (lake trout): 120027758
Help
Entry
120027758 CDS
T07522
Name
(RefSeq) phenolphthiocerol/phthiocerol polyketide synthase subunit C-like
Organism
snh
Salvelinus namaycush (lake trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
PKS_DH_N
adh_short
PP-binding
CurL-like_PKS_C
adh_short_C2
ADH_N
Thiolase_N
DUF7080
RhiE-like_linker
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
120027758
NCBI-ProteinID:
XP_038828704
UniProt:
A0A8U0TV36
LinkDB
All DBs
Position
Sna33:33451601..33472658
Genome browser
AA seq
2104 aa
AA seq
DB search
MEEEEGAIAVVGIGCSFPGGEGLDSFWKVLLEGKNCAVPIPDERFNSTYWYDADNRKPGK
SHTIKAALIDGFNEFDHKFFGITETEVEQMDPQQKLLLQCTYRALENAGMPMEKASGTKT
GVFIGLMNRDYEQSAAFMNPNLINHCTGTGLSMSIAANRISYIFNFTGPSLSIDCACSSS
LVALHLACQAIRQGDCEMALCGGVNCIIQPLVFVALSKAKMISPEGTSKPFSSRADGYGR
GEGCGIILLKPLKKALKENDHVWGIISNTAVNQDGHTVTPITKPSMVQQEELLRGIYSES
DLLSVQYIEAHGTGTPVGDPIEAGSISKVIAKARPPGSETLLIGSVKGNIGHTESAAGVA
GLIKVLLMMKHETIVPSLFYSEDSASIDAKALNVMIPTKAEKWRDSIARVAGINNFGFGG
TNAHVIVKQHKQSNVPQKSGRKSHNLFVLSASSEKSMSMMMEDTIQQIDRDNKGDLEALA
YTSACRRSHLKHRYRKAFRTLSLADLKDQLKSAMNKVTTPSYSDPRLVFVFCGNGVTYQG
MCQQLLKHEPVFRQKISQIEKLFQKFNNMSIIERLESESESKDLSKPDVVQPLLFAIQVG
IASLFKHWGIKPDAILGHSVGEVAAAHCSGLLSLEDAVKVIYFRSTLQNKVTGGKMLVVS
NMVVSEVLNLLPSYSNKISLAAFNSPQSCTLSGDAEAIDSLHRKLSSSVKSKNLFLRVLD
VPAAYHSQMMDPILSQLEDSIGSLQVNDVETQLFSTVTGKEVEQTDFSTGKYWARNIRDP
VSFEQAVRSATKEKKNVVFVEIGPRRALQRNIQETLGNDTIVLSSVQPDKDHETMLNTVS
KLFELGVQVDWDQFYRGREASPTPFPRYQFDSTQRDVIIAASKVHHTSANHPVLTHTASD
SNIFSCDLSSDSVSYLHEHKHNGVAILPGAFYIELGLAAFMASAKPKVPLNTLQVSISFQ
SPYVFTQNAPEIKVQLEPAVDETHFKIYSPSTNHASGTITCKRGQLAEEQNISLSSIYKR
CNSVLSSEKFYTEIALGGFQYGTVFQNTGDVHYGEEFKEAFSDVTVPEELLPQLHEYCIH
PVVLDFLMQLAPVTVAYRSSSRPGFPVKIGSLTVFEPLQEEMIVYLKAIDEGVDHFEVCG
CFTDKEGRVLVELKHVMIKYVGSRSHVVEEYFFHNDFNVVCEDINSSNASEAPKALVFSD
QVGLPKAMQPHLSSQSRYISFTQSKEVLSHGFPTLLANLNITDLNKHFQEVLFVWGREDV
TSLRTEYVLENMVSCCEMFRKIVLALRAMQFTNSIRVITYKAAESTVGHISAGFVLSGMT
RSCAAEMENLSFQLIDINSVSTEDIRALSQVLKSYPCKRYPELVVKGGLILKPDIVHTPI
GSIESTGGRIFSSMSEPCIFQTNDPYRMTSLSAVPCDVDDTNIQEKSVEIQLNKICVHSS
DYCPVSVSDLNYGQTIYWNNHTSQKHQLLVLDFCGTVTAVGKNVNKLKVGDHVVSCYPIA
ASSKIVIPEAACYKTKRLTFLKEAPCVSYFVLAWEILHRLLPTIKQQRRLSIISSVPDSS
LLKVLIQTANKSGWKAIVGTPCNGMFVDAILLLPPFDKSLLAEVSNCPDVRHVVIVCESQ
SHCSLEQRAFQNVKDSVHIQTLQMSSILQKGSLITKRPHIYRWLQSMHLDRISFSLETST
FQRMSSGSIDFLSVEESESYFSAKTLPVEESESYFSSKTLSVVALGKDDSKGALSNIQLL
PKPTPLFQKKSVYIVTGGLSGLGFETVKFLSKKGGEYIVILSRSSPTPDIQQEIVILERQ
WSARIVWMACDVSVSEHVLRVIGLIGQKFPSWPIKGVFHSAVVLHDGLIENLDKSHFEKV
LKPKVNGALNLHHATKHCKLDYFVCYSSIASFLGNASQTNYAAANSFLDYFCQYRRNIGL
SGQSINWGALNLGLLLNKDHLHRFLETRGLMVMDVTEIHESLEQCLLLNKPQQVVCRFHI
KNMMSNVLSQNASLTMRMTAFVDEAVQKLKFQKSQSEHTSVPSSPREYIRSVLSQTIGVD
KNELDDNSTLPALGIDSMLAMTLQNLIFQDRGVNVPLVTLLDPNGTLSTLVSILSTEGES
QNDD
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaagagggagccattgcagttgttggcattggatgcagcttccctggaggt
gaggggcttgacagtttctggaaggttcttctggaagggaagaactgtgcagttccaatc
cctgacgagaggttcaacagtacttactggtatgatgctgacaacagaaaacctgggaag
tctcacactatcaaagctgctctcatagatgggtttaatgagtttgatcacaaattcttt
ggcatcactgaaactgaagtggaacaaatggacccccagcaaaaactccttcttcagtgt
acatacagggctctggagaatgctgggatgccaatggagaaggccagtgggaccaagaca
ggagtgtttatagggcttatgaacagagattatgaacaatctgctgcatttatgaaccca
aatttaatcaaccactgcaccggcaccggactttctatgagtatagcagccaacagaatc
tcctacatcttcaacttcactggaccctctctctccattgactgtgcctgctcttcatcc
cttgttgctcttcatttagcttgtcaagccataagacaaggtgactgcgagatggctctt
tgtggtggcgtcaattgtatcatacagccactagtctttgtcgctctcagcaaagcaaag
atgatttcacctgaaggcaccagcaaacctttctccagcagagcagatggctatggcaga
ggagagggttgtgggattattcttctgaagccactaaaaaaagctctcaaggagaatgac
catgtgtggggcatcataagcaacacggctgtaaaccaagatggccacacagtcactcca
attaccaagccatccatggtccagcaagaggagctgctgcgcggaatctattcagagtct
gacctgttatcggtccagtacatagaggctcatgggactggaactccagtgggggatccc
atagaagcaggcagcatctccaaagtcattgccaaagccagacctccaggttcagagaca
ctcctcatcggctctgtgaaaggcaacattggacacactgaatctgcagctggagtggca
gggctaatcaaggtactcctaatgatgaaacatgaaaccattgtcccttcactgttctac
tctgaggacagtgccagtatagatgctaaagccttgaatgtaatgattcctactaaagca
gaaaagtggagagattctattgcaagagttgcaggaataaacaattttggttttggagga
acaaatgcacatgttattgtcaaacaacacaagcagtcaaatgttcctcaaaaaagtggt
aggaaatcacacaatttatttgtcctctctgccagttctgaaaagtctatgagtatgatg
atggaggacacaattcaacagatagacagagacaacaaaggggatctagaagctcttgca
tacacatctgcatgtagaagaagccacttgaaacatcgatatcggaaagcattcagaact
ctctctctggctgatctaaaagatcaactcaagtctgccatgaacaaggtaacaacgcca
tcttactcagatcccaggctagtatttgtcttctgtgggaacggtgtaacctatcaaggc
atgtgccagcagctcctgaaacatgagcctgtgttcagacagaagatcagccaaattgag
aagcttttccaaaagttcaataacatgagtatcatagagagacttgagagtgaatcagag
agtaaggatctttcaaaaccagatgttgtccagcccctcctctttgccattcaggttggc
atagccagtctcttcaagcactggggcatcaaacctgatgccattcttggccactctgta
ggagaggttgctgctgcccactgctctggtctgttgtcccttgaggatgcagtgaaggtg
atctacttccgcagtactctgcagaataaggtcacaggagggaaaatgcttgtggtcagt
aacatggtcgtatcagaggtcttgaacctccttccctcctactcaaataagatttccttg
gctgccttcaacagcccacagtcctgcaccctctcaggtgatgcagaggctatagacagt
ctccatcgaaagctgagcagctcagtcaagagtaagaatctgttcctccgtgttttggat
gtccctgctgcataccacagccagatgatggatcccatcctgtctcaactagaggacagt
attggctctttacaggtcaatgatgttgagacacaattgttctccacagtgacaggaaag
gaggtagagcagacggacttcagcacaggcaaatactgggccaggaacattcgagatcca
gtttcatttgaacaggcagtgagatcagcaaccaaagagaaaaagaatgtagtctttgtg
gagattggcccgagaagagctctacaaagaaacatccaggagactctgggaaatgacacc
atagttctgtcctcagtgcagccagataaagatcatgagacaatgctgaatactgtgtcc
aaactgtttgagttgggggttcaggtagactgggatcagttctacagaggccgtgaggct
tcaccaacacctttcccaaggtatcagtttgattctactcagagagatgttatcattgct
gcatcaaaggtacatcatacatcagctaatcatcctgtgctaactcatacagctagcgat
agcaatatcttcagttgtgatctgtcttctgactcagtatcctacctgcatgagcataaa
cacaatggtgttgccatactccctggtgccttctatattgagttgggtttggctgccttc
atggccagtgccaaaccaaaggttccactcaacacactgcaagtcagtatcagttttcag
agtccctatgttttcacacagaatgcaccagagattaaagtgcaacttgaaccagcagtg
gatgagacccattttaagatatattctccctccacaaaccatgcatcaggtacaataacg
tgcaagcgaggacagctagctgaagagcagaacatttcgctaagctcgatctacaaaaga
tgcaattcagtgttgagttctgaaaagttctacactgaaattgctctgggtgggtttcag
tatggcactgttttccagaacacgggggatgtacactatggtgaagagtttaaggaggct
ttttcagatgtcacagttccagaggaattgctgcctcagttgcatgaatactgcattcac
cctgtagtgttagacttcctgatgcaacttgctcctgttacagtagcatatagatcctct
tcaaggcccgggtttcctgtcaaaataggcagcttgacagtgtttgaacccctgcaagag
gaaatgattgtgtatctgaaagcaattgatgaaggcgttgatcactttgaagtatgtggt
tgctttacagacaaagagggaagagttttggttgagcttaagcatgtgatgattaaatat
gttgggagccgctctcatgttgttgaagaatactttttccacaatgacttcaatgttgtc
tgtgaggatatcaattcctctaatgccagtgaggcaccaaaggccttggtcttttctgac
caggtaggccttccaaaagccatgcaaccacacttaagttcacagtctagatacatctcc
ttcacacaatctaaggaggtcttgagccatggatttcctacactcctggcaaaccttaat
atcacagatctcaacaaacactttcaggaggtcttatttgtgtggggtcgggaagatgtt
acttcactaagaaccgagtatgttctggagaatatggtaagctgctgtgagatgttcagg
aaaattgtcctggcactgagggccatgcaatttacaaattctatcagagtaataacctac
aaggcagcggagagcacagtgggccacatcagcgcaggctttgtcctgtcaggcatgact
agatcgtgtgctgcagaaatggaaaacctttccttccaactgattgacatcaactctgtc
tctacagaggacatcagagctctgtctcaggtcttaaagtcatacccttgcaaaagatac
ccagagttggttgtgaaaggtgggctgattttgaaacctgatattgtacatactcccatt
ggaagcattgagagcactgggggaaggattttctcttcaatgtctgagccatgcatcttt
cagacaaatgacccctacagaatgactagcttgtctgctgttccctgtgatgttgacgat
acaaacatccaagagaaatcagttgagattcagctcaataagatatgtgttcattcctca
gactactgtcctgtcagtgtctctgacctgaactatggtcagacaatatactggaacaat
cacacatctcagaagcaccagctcctggttcttgacttctgtggtactgtcacagctgta
gggaaaaatgtgaacaaactgaaagtgggagaccatgtcgtatcatgttatcccattgct
gcatcttctaagattgtgattcccgaagcagcatgctacaagacaaagaggctcacattt
ctgaaagaggctccttgtgtctcctactttgttctggcatgggaaatactgcacagactg
ttacctaccatcaaacaacagagaaggttgagcatcatctcctctgttcctgactctagt
ctgctgaaggtcctaatccaaacagcaaacaaatcaggatggaaggccattgtagggaca
ccgtgcaatgggatgtttgttgatgcaattctcctccttccaccatttgataaatctctg
ttggcagaagtcagcaattgtcctgatgtcagacatgttgtcattgtctgtgaatcccag
tcccactgctcgcttgaacagagggctttccagaatgttaaggatagtgttcacatacag
actcttcagatgtccagcatcttacaaaagggatcactcattaccaagaggccacacatt
tatcgttggctccagtccatgcatttggacaggatatcattttctctagagacctctacc
tttcagagaatgtcatccggtagcattgacttcctgtctgttgaggaatctgagtcgtac
ttcagcgcaaagactctgcctgttgaggaatctgagtcgtacttcagctcaaagaccctg
tctgttgtggcgctgggtaaagatgattccaaaggtgcactgtccaacattcagttgctg
cctaaaccaaccccgcttttccagaagaagtctgtgtacattgtcacaggtggtctctct
gggctggggtttgaaacagtgaagttcctttcgaagaaaggtggagagtacatcgtcata
ctctccagaagtagccccacaccagacatacagcaggagatagtcattctggagagacaa
tggagtgcccgtattgtatggatggcatgtgatgtctctgtctctgagcatgtgctcaga
gtgattggtctcattggtcagaagtttccctcttggccaatcaaaggggtgtttcacagt
gcagtcgtcctgcatgatgggttgattgaaaaccttgacaaatcccactttgagaaagtc
ctaaagcccaaggtgaatggagctctgaatctgcaccacgccacaaaacactgcaagtta
gactactttgtgtgctactcttccatcgcttctttccttggcaatgcctcacaaacaaac
tatgcagcagctaattcattcctggactacttctgtcagtatagacggaatattggccta
tctgggcaatccatcaactggggagctttgaaccttggtctcctgcttaacaaggatcat
ttacacaggtttctggagacaaggggattgatggtgatggatgttacagagattcatgag
agtttggaacaatgcctcttgctaaacaaaccccaacaggttgtatgtaggtttcacatc
aagaacatgatgagcaatgtcctctctcaaaatgcatcattgaccatgcgtatgactgca
ttcgtggatgaggcagtgcaaaaactcaaattccaaaagtcacagtctgaacatacttct
gtgccatcatccccacgtgaatacatcaggtctgtactgagtcaaacaattggtgttgac
aagaatgagttagatgacaattctactctccctgccttaggcatcgactcaatgctagcc
atgaccctgcagaacctcatctttcaggataggggtgtgaatgtgcctctggttacattg
ctggaccccaatgggacactgtctacattggtatcaattctgagtactgagggtgaatct
cagaatgatgattag
DBGET
integrated database retrieval system
