KEGG   Salvelinus namaycush (lake trout): 120027760
Entry
120027760         CDS       T07522                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120027760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:snh03041]
    120027760
Spliceosome [BR:snh03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120027760
 Complex B
    120027760
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 120027760
NCBI-ProteinID: XP_038828707
UniProt: A0A8U0PPJ1
LinkDB
Position
33:16712687..16729620
AA seq 1012 aa
MADRTPGGTQKANAKALLESKLKSFSIGKMAVSKRTLSKKEQEEIKKKEDELAAAEIYEE
FLAAFEGGEGKVKAFVRGGIANATKEEAASDDKKGKLYKPKSRFETAAAPKSSFLPLETP
PQFLTLDKRHTLKKTNEKEKKKSNLELFKEELKQIQEERDERHKMKGRVSRFEPLSGMEG
KRSSLDGSSRRNRPSSVLDDAAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNAKMIMNFEMKLGWGKGVPIPP
HPIYIPPSMVEHTLPPPPSGLPFNAQPCERLTNPNAALLPPPKNKEEFHKTLSQAIVKVV
IPTERNLLSLIHRMIEFVVREGPMFEAMIMNRELSNPMYRFLFENQSPAHVYYRWKLYSI
LQGEAPTKWRTDDFRMFKNGSLWRPPPLNPYLHGNFEEGEGPEEEEEEPGKKGCLKEEER
DQLEEMLRALTPRKGDIAEAMLFCLLHAEAAEEIVECVTESLSILKTPLPKKIARLYLVS
DVLYNSSAKVANASYYRKYFETKLCQVFSDLNATYKTIQGHLQSENFKQRVMSCFRAWED
WAVYPDPFLIKLQNIFLGLVNLSADKEAPAPITVEKPSVEHLAQPEPAEDIDGAPIGEDM
DGASLEDVDGVPIGLDGGTMVDGASLGSAPLGSAPLDGAPLGMDDLDGVPIKALEEDIDG
VPLDHAAAKAASFKVAPSKWEAVDESELEAQAVTTSKWEIFEQPEEKKDEDDSDDEDTKS
SRSEEPPSYPNPIRDDLDSKTKHSEMNEDRRTKLREIEVKVMKFQDELESGKRPKKSGQS
LQEQVENYREKLLQKEKEKEKLEREKEREKKDKEKSEARSKDIKKEKEESTPTRKDRRGL
SPVVARKRRHSGSPGSPPRSSSRRVRSPSPRSERSERLYSKDVGSSRSRSSHKDSPRTTI
IKKSSKRSPSLSRTPKRSRRSRSRTPKKSTKKSRSKSRSPHRSHKKSKKSKH
NT seq 3039 nt   +upstreamnt  +downstreamnt
atggcggacagaacgcctggtggtacgcagaaagccaacgcaaaggcgctgctggagagc
aagttgaagtccttcagcattggaaaaatggccgtgagtaagaggaccctaagcaagaag
gaacaagaggaaatcaaaaagaaggaggatgagctggcagctgcagagatctatgaagag
ttcctggctgcgttcgagggaggagagggaaaggtcaaggccttcgtccgagggggtatt
gctaatgcaactaaagaggaggctgcttctgatgacaagaagggcaagctgtataaaccc
aagtcacgcttcgaaacagcagcagcaccgaaaagcagcttcctgcctttggaaacccct
ccgcagtttttaacattagataaaagacatacactgaagaaaacaaatgaaaaggaaaag
aagaagagtaatctagagctctttaaggaagaacttaaacaaatacaggaagagcgggat
gaaagacacaagatgaaaggcagagtcagtcgatttgaacctctctccgggatggaggga
aaacgctcctcattggatggttcttcaagaagaaaccgtccgtccagtgttctggatgac
gctgcacctggttcccatgacgtcggagacccctctacaactaacttatatctcggaaac
atcaacccacagatgaacgaggagatgctgtgtcaggagtttgggcgctatggccctctg
gccagcgtgaagatcatgtggccgcggacagatgaagagagggccagggagaggaactgt
ggctttgtggccttcatgaaccggagggatgcggagagagctctgaagaacctcaacgcg
aagatgatcatgaactttgaaatgaagctgggctggggtaaaggcgtgcccatcccccct
caccccatctacatccccccgtctatggtggagcacaccctccccccgccgccctccggc
ctgcccttcaacgcacagccctgcgagaggctgacgaaccccaacgccgccctgctccct
ccgcccaagaacaaggaggaattccacaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgt
gagggcccaatgttcgaagccatgatcatgaatcgagagctcagcaaccccatgtacagg
tttctgtttgagaaccagagcccagcacacgtgtactaccgctggaaactctactccata
ctacagggagaagcaccaacaaaatggcggacggacgacttccgcatgttcaagaacggc
tcactgtggcgccctcctcccctcaatccctacctgcacggcaactttgaggagggggag
gggcctgaggaggaagaggaggagcctgggaagaaaggctgcttaaaagaagaagagcgt
gatcagctggaggagatgttgagggctctgactcctagaaagggggacatagccgaagcc
atgctgttctgtctcctgcacgccgaggctgctgaggagatcgtagagtgtgtcacagag
tccctctccatcctcaagacaccactccccaagaagattgcacggttatatcttgtctct
gatgtgctgtacaactcatccgctaaagtagccaatgcatcgtactacagaaaatacttt
gagaccaagctttgccaggtcttctcagacctcaatgcaacgtacaagacgatacagggt
cacctgcagtctgagaactttaagcaacgagtgatgtcgtgtttccgtgcgtgggaggac
tgggccgtgtacccagatcccttcctcatcaagctgcagaacatcttcctgggtctagtc
aacctatcagctgataaggaggctcccgctcccatcacagtagagaaaccatcagttgaa
cacctggcccagcctgagccagcagaggacatcgacggggcccccatcggggaggatatg
gacggggcctctctggaggacgtggatggggtccctatagggctggatggagggaccatg
gtggacggagcctccctaggctctgcccccctaggctctgccccccttgacggagccccg
ctggggatggatgatctggacggagtgcccatcaaggccctggaggaggacatagacgga
gtgcccttggatcatgctgcggccaaagcagcatcctttaaagtagcaccttcaaaatgg
gaagcagtggacgagtctgagctagaagcacaggccgtgaccacctctaaatgggagatc
tttgagcagccagaggagaagaaggacgaggatgacagtgatgatgaggacaccaagagt
tcccggtcagaagagcctccgagttaccccaaccccatcagagacgacttggactccaag
accaagcactctgagatgaatgaggacagacgcaccaagctccgggaaatagaggtcaaa
gtgatgaagttccaggatgagttggagtctgggaaaaggcccaagaagtctggccagagt
ctccaagagcaggtggaaaactacagagagaaactcttacagaaggaaaaagaaaaggag
aaactggaacgagagaaagagagggagaaaaaggacaaggagaaaagcgaagctcgctct
aaagacatcaagaaggagaaggaggagtctactccgaccaggaaagacaggcgtggcctg
tctcctgtggttgctaggaaacggcgccacagcggctcacccggcagccccccacggagc
agcagtagacgggtgcgctccccatccccccgctctgagaggtcagaacgcctctactcc
aaggacgtagggtcatcacgatcccgctcctcccacaaagactcccctcgaaccaccatc
atcaagaagtcctctaaaaggtctccctcgttatcccgcacgcccaaacggtcccggagg
tcacgctccagaacacccaagaaatccacaaaaaaatcccgttcaaaatcacggtcccca
caccggtcccacaagaaatcaaagaagagtaaacactga

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