Salvelinus namaycush (lake trout): 120027788
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Entry
120027788 CDS
T07522
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120027788
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120027788
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-H2C2_5
zf-met
zf-C2H2_6
Zn_SUZ12
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
120027788
NCBI-ProteinID:
XP_038828742
UniProt:
A0A8U0PR06
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All DBs
Position
Sna33:11145528..11218531
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AA seq
1212 aa
AA seq
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MADGPRCKRRKQANPRRNNVTNYSNVVKTPGSDSDDEDKLHIVEEDGSLADCDSNVPSED
HNGDRSDEAREECGSDGEDDGRTDALVEEMLQQGDTAVIYPEAPEDEPRQGTPEASGHDE
NGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLERHM
TAHKAGRDQRHVTQSGGNRKFNCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKRFSH
SGSYSSHISSKKCISVISAVNGRPRPSAKASQCPSPAMPASPSSTTRTQIWDKPLQEQLP
LNQIKSEPVDYEYKAMVLSPATTGGNGHGGGVLNGGATAPLQGAVQAVMLPTMGLVSPIS
INLADLQNILKVAVDGNMIRQMLENNAKAAGTGTGATGVPHQQLISAISLPIIGQDGNAT
KIIINYSLDPSQTQLTAQNLKKEPQTLATMPGQPLAEAVIEPCSKAQQRLPEDLTLSRPP
RSKEEKMEEENEKEEGEETTKTCLLCDDCPGGLDVLHVLEHCKKASGLKINGDKSESAIA
SLLSKGVGNQPKNLLSLLKAYFALNAEPTKEELSKISDSVSLPTDVVKKWFDKMQSSQVS
LGAPTPPSEEEGPLSESPGATVVSPKVRSEQDTEGPTMMQSGPAEATPAEVNGSMRSPAS
PTPLNLTAGGPVPAKPSSSDSTDGPLDLSLPKPTREEAAAAATYHAAVYSHQDEPLNLTK
TCTTKKELPLARAAGHHVTGQPVSLYTASPQSANPISIMTTQLPSGTIYAITDQGRAGMP
CLRAVTTSNNQTILIPQLAYTYTTTATANSPAGTETQEKTTLQVNGIKEERQDTSSEGVS
TMEELNDSDSAPSRKKMRKTESGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICRK
AFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAQEGSQGGIG
EEVLEEEMESPVGLALGLGGEQQEQSDSRPTSSHLDSDERGSSTREDEEESEEEGEEEDM
ETAAGEEVEGDPDRVLDMDDIQVVRIGDEGGDEEDEAEGEKEEDTGREEGENEEEQGVER
VVVGGEGEEGEEEGVVGVEVKEEQEEEEVTGKKADTRQEEVQENREKEEEHEGEKEQAEE
QVEEELSEKEELSEKEETMDTEKGLTSEDKEESGSRAAEESEVMKENEGETNRNTVSEDK
NQTPTGEKGDPN
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaatccgaggaggaataacgta
accaactacagtaatgtggtgaagacccctggctcagactcagatgatgaggacaagctg
cacatcgtggaggaggacgggagtctggcagactgtgatagtaatgtgcccagtgaagat
cacaacggagaccgctcagatgaagcgagggaggagtgtggttcagacggggaggacgat
ggcaggacggatgctctggtggaagagatgctgcagcagggagacacggccgtcatttac
ccagaagcgccggaggacgagccacgccaagggacgccagaggccagcggacatgacgag
aacggcactccggatgcgttctcccagctcctcacctgtccctactgctcccgcggctac
aagcgttacacgtccctgaaggagcacatcaagctgcgccacgagaagagcgaggacaac
ttcagctgctcccagtgcagctacacttttgcctaccgcacacagctggagagacacatg
acggcccacaaagctggtagagaccagaggcacgtgacgcagtcggggggcaaccgcaaa
ttcaactgcaccgaatgtgaaaaagcatttaagtacaagcaccacctgaaggagcaccta
cgcatccacagcggagagaagccgtacgagtgctccaactgtaagaagcgtttctcccac
tcgggctcctacagttcccacatcagcagtaagaagtgcatcagcgtgatctcggcagtc
aacggccgcccccggcccagcgccaaggcgtcccagtgcccgtccccagccatgcccgcc
tcgccctcctccaccacacgcacacagatctgggataaacctttacaggagcaactaccc
ctcaatcagatcaagagcgagccagttgactatgagtacaaggccatggtgttgtctcca
gcaacgacgggaggaaatggtcatggaggaggggtgttaaacgggggtgccacggccccc
ctgcagggtgcggtgcaggctgtgatgctccccaccatgggtctggtatctcccatcagc
atcaacctggcagacctgcagaacatcttgaaggtggcggtggacggtaacatgatcaga
cagatgttggagaacaacgccaaggcagcggggaccggcacaggggcgacgggggttcct
caccagcagctcatctcagccatcagtctgcccatcatcggtcaggacggcaacgccacc
aagatcatcatcaactacagcctcgatcccagccagacccagctcactgcccagaacctg
aagaaggaacctcagaccctggctacaatgccaggccagcccctggccgaggctgtcata
gagccctgcagcaaggcccagcagagactcccagaggacctgacactcagcaggcccccc
aggagcaaagaggagaagatggaagaggaaaacgagaaggaggagggggaggagaccact
aagacctgtctgctctgtgacgactgccccggtggtctggacgtgctccacgtactcgag
cactgtaagaaagcctcaggcctcaagatcaatggggacaaatcagagtcggccatcgcc
tcgttactgtccaagggggtcgggaaccagcccaagaacctcctgtccctcctcaaggcc
tacttcgccttaaacgctgagccaaccaaggaggagctcagcaagatctcagattcagtc
agcctgcccaccgacgtggtcaagaagtggttcgacaagatgcagagcagtcaggtttca
ctaggagctccgacacctccgtctgaggaagagggacccttgtctgagagtcctggggcc
acagttgtgtcccctaaggtaagatcggagcaggacacagagggtcccaccatgatgcag
tccggcccagccgaggccactccggctgaggtcaacggctccatgcgctccccagcctcc
cccacaccactaaacctgaccgccggggggcccgtcccagccaaaccctcctcctcggac
agcactgatggccctctggacctgtcgctaccaaagcccacccgagaggaggccgcagcc
gccgccacttaccacgccgctgtttactcccatcaggacgaacccctgaacttgacgaag
acttgcacaacaaagaaagaacttccgctcgctcgcgccgctggccaccacgtgactggt
caacctgtgtccctgtacaccgccagcccacaaagtgccaaccccatcagtatcatgacc
actcagctgcccagcgggaccatttatgccatcactgaccagggccgtgcaggcatgccc
tgcctccgggcagttaccaccagtaacaaccagactatcctcatcccacagctggcctat
acctataccactacagctacagccaacagccctgcagggacagagacacaggagaagacc
acactgcaggtcaacggcatcaaggaggagcgtcaggacaccagctcagagggcgtgtcc
accatggaagagctgaacgactcagactctgccccttccaggaagaaaatgaggaaaacg
gagagtgggatgtacgcctgcgacctgtgtgacaagatcttccagaagagcagctctctg
ctccgacataaatacgaacacacaggcaagcgaccccacgagtgcggtatctgcaggaag
gccttcaaacacaagcaccacttgatagaacacatgcgtctccactctggagagaagccc
taccagtgcgacaagtgtggcaagcgcttctctcactcgggctcctactcccagcacatg
aaccaccgttactcctattgcaagaaagaggcgcaggaaggaagtcagggaggtataggg
gaggaggtgctggaggaggagatggagagccctgtggggttggccctgggcctcggaggg
gagcagcaggagcagtcagacagcaggcccacctcctcccacctggactctgacgagcga
gggagcagcaccagggaggacgaggaggagagcgaggaggagggagaggaggaggacatg
gagacagcggcaggggaggaggtggagggggatccagacagagttctggatatggatgat
atacaggtggtgcggataggagacgagggaggggacgaggaggacgaggcggagggggag
aaggaagaagacactggtcgagaggagggagagaatgaggaagagcagggagtggagaga
gtagtggtggggggtgaaggggaggaaggagaagaagagggggtagtgggggttgaagta
aaggaggagcaggaggaagaggaggttacagggaaaaaggcagacacaaggcaagaggag
gtacaggagaacagggagaaagaggaggaacatgaaggtgagaaggaacaggctgaggag
caggtggaggaggagctgtctgagaaggaggagctgtctgagaaggaggagacaatggac
acagagaaaggattgacctcggaggacaaggaagagtcagggtcgagggcggcggaggaa
agcgaggtcatgaaagagaatgaaggtgaaacaaacaggaacactgtttcagaagacaag
aaccagacaccgacaggagagaaaggtgatccgaattaa
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integrated database retrieval system
