Salvelinus namaycush (lake trout): 120027804 Help Entry 120027804         CDS       T07522                                  Name (RefSeq) rotatin-like   KO K16484   rotatin Organism snh  Salvelinus namaycush (lake trout) Brite KEGG Orthology (KO) [BR:snh00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:snh03037]     120027804 Cilium and associated proteins [BR:snh03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    120027804 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RTTN_N ARM_LIN_2nd Motif Other DBs NCBI-GeneID:  120027804 NCBI-ProteinID:  XP_038828772 UniProt:  A0A8U0PR22 LinkDB All DBs Position Sna33:complement(20345549..20407044) Genome browser AA seq 2250 aa AA seqDB search MELSPLIKKIGHSLAEIRVRALKSIICKLDHSLLSVSDLVQEKMLFVYLLEWFNFPEVPM QEEVLQLISTLSKHPTAAQMLRDVGAVEFLTQLSPNVEPWLRAIIDGIFDLLFQLPELLP ACPNIYSNIHQLQNTTTAVPLEEDSPAVGYFQTKRPSHIDVPPQRIAVNNSVRCLKFSTF PWLALTTTDQHILSSNESSLRSNNHNLVRTTCELLRDVIMQDFPAEIFLQRPSIVQNLLS ILRLTPGESEAGYLRLQAVACLQQLCVGLRRRLRFHRDPSFYSAKQDPVSQNSSLSYSQE VHGGGAQRSLASSPGGECFPRPSVVGRNGQRPRGDGQDGDAASNSSSSQRGGAAAQASRQ TAPSPADAAQLELPDLGVEDVLELQLQQLSLAQFTVATMEHAIPLLRTDGVRVFRGVCEL LCEAVVLLRDGVCDLVWDDTSLVGMELREKLKITMETLGDIMTYHESCSSDCPESSLVQH RLAYVATAVFTIRLLQTILPLEKASGHLPESAVAVLLSLCLDRPFSLAYPSMAEAAVAYL EQVNPEGHDLYRRTSRAALWMESTCMFLKETQQQGDKNWLELLELADQAIDGLPYHQHLT IVKECIHICSYLWKFEQASPLLQTESQRVLLKLLTHPLLPVKTETYTCTLNVVKECLGVQ NVVKPVSSVCSGVNFLLHPKVLYQISAFGLQDPIGKVNSAAKDILLFLLKCPLMMTASTW DRFNQALYPVIPILQSYAGTEDALGNCVLLISEVSNEVRDGVFPNTAKLRAALRLLFTKE PEVRAAAVQHLLPHLTSVEGATTVRPTLEGPVLSSLPSLFCLNNALDINLDSSDKSFLKV ESVEKLFSILTSDTVDLTLRRSAAEQLAVVLQETAMHPVLKSLGVTDKVICFITESVNDH RKSMDCLLEPCVCILRKLVYADPSLRHLLAEKNPLLITLLRASLLVKENKGDVREAAVLM CLLLFDEIATVEVWSENSSSDVALSPFSLPVSVIRRYSLPFQAASHHAVSPYCSVLPPYS DLLSLTPAKETLQLAWNTAWHSGIDNLLEELRGIRSDVADFHSDLSLSGSQVLSLRATHL PSGLQDCVQDIVMAAGHASVTSALSRLRLHLLIDRMAITGTHTHSCRDTLRSLTWQPAIA RFVQVRPACVEDERLLVDVIAFLRAYFKQSHLESEDKDLRWILELLLKQETNSLLDLLLG EESQTHTASQGETEELVELRAQINQRLQRELTGFINTLLHRLTHTTDRFCLALAGPFESQ LAVRFLQCLRVSDAPRFYGLPSLERNLLGMVSLTAQPGWSSHCPTMEPQSLCTKYLGGLL EVISSFYVEWGGNSMSFMGKGVTKNAVICLLHLSHEMMAQNKDKDFISQWSLGQEAGSDD PSGSQLGLAWLIPLWVDRDPEVRFASLGVGSALSSVPSGCQSLSSSCQNISGGLWGTLLN ILLDQQESTMVRREAVFILQNLLVMPMPATADQVTDSTWQSPCVHDESSGVCLVGLQALQ ALLYHCQFFQHTALMATACYRGRYTFDLQPSARDPGPQDSTTEDADDSLRLWRPPKGVPV NPSRASGSLSTSSTLIIPGGSRLQSPVPTSLNATAQDTPASRLIAQGQSDTDTIDSVLSQ DSRLADPAPDPTCVIVTPDLLSALCGLLANLLAVLPEFTLSALTHSQLFQSLASLVDAAA IERCLGELKTNTLPGDQEDIKRQVLTLLKFLSSFSKFLKSCFILSSDLIGQMDFLKPLLA NLFTVLTLDTKDLGDGTRGAVCVCWTDVLMLLATVVRRDGSAAYQSLSAALGRCWNTFTA TLSVCVDQSFSDPPLHAAVLQFLCVVLSEEAKRRPLEVTTLNPDLQLTPLSEALNGASGG QLCELLLESFEKRAFQDPVKKKTAKALMALLACSSTAQNHAAKAGLIDSCVEQMKLMHSH LHMESVRPGRGRRKEESYMKEIKMSLEILRNSLYQNSQSKAVATDCRLAAVLHALWPWFL LDDAAMESVLELLCVYTANCTTACSSLCCGLASGPRGPPGGSLMHCVMKLASGVAPDNSL VQQLAFSLLANLAINKDCKGVLHKSNFLQPFLSLPVPKPGSKTGAVGLLGLWLRLLLSVS FGEDGQLSVLRLTGALDLLADLAATQPQRQRHYSNGSRPITTTDNALLILHNVCFSSANK PKVLANDKAMRVLVSCLDSKEAEVCSIGASALWALLHNYQKAKTTLKCPSVRLRVHEAYK VAKKDAEKNPDIMNTYLLKCLENLIQLLNT NT seq 6753 nt NT seq  +upstreamnt  +downstreamnt atggagttatctccgcttataaagaagattggtcactccttggcagagatcagagtccga gcattgaagagcataatttgtaagctagaccactctctcctctctgtctctgacctggtc caggagaagatgctgtttgtttacctgctggagtggtttaacttccccgaggtgccaatg caagaggaggtcctgcagctgatcagtactctgtccaagcaccctactgcagcccagatg ctgagagatgtcggggcagtggagttcctcacccaactctcccccaacgtagagccatgg ttacgggccatcatcgacggcatcttcgacctgctgtttcagcttccagagctacttcct gcttgtccaaacatctattctaatatacaccagttacagaacaccactactgcagttccc ctagaagaggactctccagcggtgggctatttccagacaaagaggccgagtcacattgat gttccaccacagaggatagcagtgaataactccgttagatgtctgaagttttctacattt ccctggttggctttgaccacaacagaccaacacatattgtcatctaatgagagttctcta aggagtaacaaccacaacttggtgaggaccacgtgtgagctcctacgtgacgtcatcatg caggacttcccggctgagatatttctccagcgtcccagtatcgtgcagaacctcctgtcc atcctgaggctgactccaggtgagagtgaggcgggctacctgagactgcaggcagtggcc tgtctacagcagctgtgtgtggggctgaggaggagacttcgtttccacagagaccccagc ttctactccgcaaagcaagacccagtgtcccagaactcgtcactgtcttactcccaggag gtgcatggggggggggcccagcgctccctggcctcgtccccaggaggagagtgctttcct cggccctctgtggtggggcgtaacggccaaaggcccagaggggacggccaagatggggat gctgcctccaacagcagtagctctcagagaggtggagctgccgctcaggcctccaggcag accgccccctcgcctgcagacgcagcccaactagagctgcctgatctgggggtggaggac gtcctcgaactgcagctccagcagctcagcctggcccagtttactgtggccaccatggag catgccataccactgctcaggacagacggcgtgcgtgtgttccggggtgtgtgtgagctg ctgtgtgaggcggtggtcctgctgagagacggtgtgtgtgatctggtctgggacgacacc agcctggtggggatggagctgagggagaagctgaagattaccatggagacactgggtgac atcatgacctatcatgagagctgttcctcagactgtcctgagagttcattggtccagcac agactggcctacgtagccactgccgtcttcaccatcagactgctgcagaccatcctgccc ctggagaaggccagtggtcatctcccggagagtgctgtggcagtcctcttgtctctgtgt ctggaccggcccttcagcttggcctatcccagcatggcggaggctgcggtggcctacctg gagcaggtgaaccctgaaggccatgacctctacaggaggaccagccgtgctgctctctgg atggagtccacctgcatgttccttaaggagacgcagcaacagggagataagaactggctt gagttactggagctggcagaccaggccatagatggccttccataccaccaacacctaacc attgtcaaggagtgcatccacatctgctcctacttgtggaagtttgagcaggccagtccg ctgctccagacagagagccagagggttctactgaagcttctgacccatcccctcctccct gtgaagactgagacctacacctgcactctcaatgtagtcaaggagtgtcttggggttcag aatgtggtcaagcccgtgtcgtcagtctgtagtggggttaatttcctccttcaccccaaa gtcctctaccagatcagtgcatttggactccaggacccaattgggaaggtaaactctgct gccaaggatattctgctcttcctgctgaagtgcccattaatgatgacagcatcaacatgg gacaggttcaaccaggcactttacccagtcatccccatattacagagttacgcaggcaca gaggatgcgctgggaaactgtgttcttctgataagtgaagtgtcaaacgaggtgagagac ggcgtgtttccaaacacagccaagttgagagctgcgctacgactactcttcactaaggag ccggaggtccgagctgcagcagtccaacaccttcttccccacctgaccagtgtagagggg gctactacagtcagaccaaccctggagggtcctgtcctctcctctctcccctccctcttc tgtctcaacaatgcactggacatcaacctggacagcagcgacaagtccttcctcaaggtg gagtcagtggagaagctgttcagcatcttgacctctgacactgttgacctgaccctcagg aggtcagcagcagaacaactggctgtcgtcctacaggaaacagcaatgcacccagtgttg aagagtcttggtgtaacagataaagtgatctgcttcatcacagagagtgtgaacgaccac aggaagagcatggactgcctgttggagccgtgtgtgtgtattctgagaaagctggtgtat gcagacccctccctgaggcatcttctggctgagaagaaccccctcctcatcactctgctc agggcttcattgcttgtcaaggagaacaaaggggatgttcgtgaggcggctgtgttgatg tgtctgctgctctttgatgagattgccacagtagaagtgtggtcggaaaattccagctcc gacgtggctctctcaccattctctctccctgtgtccgtcatacgaaggtacagcctaccg ttccaggccgcgtcccaccatgcggtgagcccctactgctccgtcctgcccccctactct gacctcctctccctgacccccgctaaggagaccctgcagctggcctggaacaccgcatgg cattctgggatagataacctcttggaggagctccgtgggatccgcagtgatgtcgccgat ttccacagtgatctgagcctgtcagggtcacaggttctgtcgttacgggcaacgcacctc cccagcggccttcaggactgcgtccaggacatcgtcatggcagcaggccatgcctctgtg acctctgcactctccaggctccgcctccacctgctgattgacaggatggccatcacaggc actcacacacacagctgcagggacactctccgttccctcacctggcagcccgccatagca aggtttgtgcaggtgcgtccagcgtgtgtggaggatgagaggttgctggtggacgttata gcgttcctgagagcctacttcaaacagagccatttagagtccgaggacaaggacctccgc tggatactggagctactcctcaaacaggagaccaactcactgctggacctgctgctcggc gaggagtcgcagacacacactgcgagtcagggagagacggaggaactagtagaactgagg gcccagatcaaccagagactacagagagaactgacagggttcatcaacacattactgcac cgcctcacacacaccaccgacaggttttgcttggcgctggcagggcccttcgagagccag ctggcagtgcggtttctccagtgcctgcgggtgtcagacgccccacgcttctacggcctc ccgagtctggagaggaatctgctgggcatggtcagcctcacggcccagcctggctggagc tcacactgtcccaccatggagccccagtctctctgcaccaagtacctcggtggactactg gaggtgatctcgtcgttctacgtggagtgggggggtaactccatgtccttcatggggaaa ggagtcaccaagaatgctgtcatctgtctgcttcacttgtcccatgagatgatggcccag aacaaggacaaggacttcatttcccagtggtctttgggtcaggaggcggggtctgatgac cccagtgggtcacagctgggtctggcctggctcatacctctgtgggtggacagagacccg gaggtgaggtttgccagcctgggtgtgggctctgccctgtcctctgtgcccagtggatgc cagtctctgagtagcagctgtcagaatatcagtggaggtctgtggggaaccctgctcaac atcctcctggaccagcaagagagcaccatggtccgcagagaggcggtgtttatcctccag aacctactggtgatgcccatgcctgccacagctgaccaggtcaccgactctacctggcag agtccgtgtgtccatgatgagtcttcaggtgtatgtctggtgggtctccaagccctacag gctctgctctaccactgtcagttcttccagcacactgccctcatggccacagcctgctac agaggcaggtacaccttcgacctgcaaccctcagccagggaccccggccctcaggacagc accactgaagatgcggatgactccctgaggttgtggagacctcctaaaggagtcccagtg aatcctagcagggcctctggctccctgtccacctccagcactctgatcatacctggaggc tcaaggcttcaatcccctgtgcccacttctctcaatgctactgcacaagatacacccgct agcagactgattgctcaaggtcagagtgacacagacaccattgactctgtcctctcccag gactccagactggctgaccccgctcctgaccccacctgtgtcattgtgaccccagacctt ttatcagcactctgcggcctcctggccaacctgttagccgtgctaccggagttcaccctc tcagccctcacacacagccagctcttccaatcactggccagtttggtggacgcagcagcc atagagagatgtctgggtgagctgaagactaacacactaccaggagaccaggaggacatt aaacggcaggtcctgaccctgctcaagttcctgtccagcttctctaagttcctgaagtca tgtttcattctgagctcagatctgattggtcagatggacttcctgaaaccgctactggcc aatctcttcactgtcctcacacttgataccaaggacttgggcgatggtacccgtggtgct gtgtgtgtttgctggacagacgtgttgatgcttctggctactgtggtgaggcgggatggc tctgcagcctaccaatctctctctgctgcactagggagatgctggaacacattcacagcc acgttgtcagtgtgtgtggaccagtcgttcagtgaccctcccctccatgctgcggtacta cagttcctgtgtgtcgtcctgtctgaggaggccaagagacgacccctagaggtcaccacc ctgaacccggacctccagctgacccctctgtctgaggccctgaacggcgcctccggtgga cagctctgtgaactattgctggagagttttgagaagcgtgcgttccaggacccagtgaag aagaagacagctaaagccctcatggctctactggcctgcagttccactgctcagaaccac gctgctaaagctggtttgattgacagctgtgtggagcagatgaaactgatgcacagccac ctccacatggagtcagtcagacctggcagaggaaggaggaaggaggagagctatatgaag gaaataaagatgtctctggaaatcctcaggaacagtctttaccagaacagccaatccaaa gctgtggccactgactgtcgattggctgctgtgctgcacgccctttggccttggttctta ttggatgatgctgctatggagtcggtcctggaattgttgtgtgtctacacagccaactgt accacagcttgtagctctctgtgttgtggtttggcctctggcccccgagggcccccaggt ggctccctgatgcactgtgtcatgaagctggcctctggggttgcccccgacaacagcctt gtccagcagctggccttctccctgctggccaacctggccatcaacaaggactgcaaagga gtcctgcacaagagtaacttcctgcagccgtttctgtccctgcctgtccctaaaccaggc agtaagacgggggccgtggggctgttgggcctgtggctgaggctgctcctgagtgtctcc ttcggtgaggacggccagctgagtgtcctgaggctgactggagccctggacctccttgct gacctggccgctacgcagccccaacgccagcgtcactatagcaatgggagcaggcccatc accacgacggacaatgccctcctcatcctccacaatgtctgtttcagctctgccaacaaa cccaaagtactggccaacgataaggccatgagggtgctggtgtcctgtctagacagtaaa gaggctgaggtttgctctataggggcctcggcactatgggccctgctccacaactaccag aaggccaagaccactttgaagtgtccctctgtcagactcagggtgcatgaagcctataaa gttgctaagaaagatgcagagaaaaatcctgacatcatgaacacctacctgttgaagtgc cttgagaacttaattcagctgctgaatacctga

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