Salvelinus namaycush (lake trout): 120027810
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Entry
120027810 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6-like isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120027810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120027810
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120027810
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
120027810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
FAM165
Motif
Other DBs
NCBI-GeneID:
120027810
NCBI-ProteinID:
XP_038828781
UniProt:
A0A8U0TUZ3
LinkDB
All DBs
Position
33:complement(19789856..19819254)
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AA seq
933 aa
AA seq
DB search
METADEADICRVCRSEGTPDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRF
AFTPIYSPDMPPRLPIQDICAGLLTSVGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLF
TGSVSSLLTLPLDMLSTENLLADCLQGCFVVTCSLCAFISLVWLREQIVHGGPPLWLEHH
QQPQPNAAGQQPNEAAGAGQGAADDPPAAPPAPAAPPAHNEAEPEPPDGLPEQGEEPELD
NEEEGAAAEDADANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLN
TLFILVFAFCPYHIGHFSVVGLGFEEYVQASHFEGLITTIVGYILLAMTLILCHGFAALV
RFQRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDASLKDRELSFKSAP
GTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHI
RRFILSVVVFGSIVLLMLWLPIRIIKVFLPAFLPYNVLLYSDAPVSELSLELLLLQVVLP
ALLEQGHTRQWLKGLVRTWTVSAGYLLDLHSYLLGEQEDNEANQPVNNNNNNNPAPGHHN
NNPAPGHHNNNPAPGHHNNPAHVVGEGLHAAHQAILQQGGPIGFQPYQRPLRFPFRIVLL
IGFMCVTLLLASLVCLTLPVFAGRWLMSFWTGSAKIHELYTAACGLYVCWLSIRGATVLL
AWMPQGRTIIMIKVQEWTLMILKTLVVALLVAGVIPLLLGLLFELVIVAPLRVPLDQTPL
FYPWQDWALGVLHAKIIAAITLMGPQWWLKSVIEQVYANGIRNIDLHFIIRKLAAPVISV
LLLSLCVPYIIAAGVVPTVGVTPGMQILIQRRIYPFLLMVVSIIGILSFQIRQFKRLYEH
IKNDKYLVGQRLVNYERKARGASSVPPPNHIPE
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggcagatgaagcagatatatgtcgtgtgtgtcgttcggaggggaccccagac
aagcccttgtaccacccctgtgtatgcaccggcagtattaagttcattcatcaggaatgt
ttggtccagtggctgaagcacagcagaaaggagtactgtgaattatgcaagcacagattt
gctttcacaccaatttactccccagacatgcccccccgcctgcccatccaggacatctgt
gctggcctgctgaccagtgtgggcacggccatacgatactggtttcactacacactggta
gccttcgcatggctgggggtggtccccctcactgcatgtcgaatctacaagtgtctgttt
accggctccgtgagctcgctcctgacgctgccattggacatgctttccacagagaacctg
ctggcggactgtctacagggctgtttcgtggtgacgtgttcgctgtgtgctttcatcagc
ctggtgtggttaagagagcagattgtccatggtggtccccccctgtggctggagcaccac
cagcagccccagcccaacgcagctggacaacagcccaacgaggctgcaggtgcaggtcag
ggagcagctgatgacccccctgcagccccccctgcccccgccgcccctccagctcacaac
gaggcagagccagagcccccagacggcctcccagaacagggggaggaaccagaactagac
aatgaggaagagggggcggcggctgaagatgcggacgccaacaatggagctcaagatgat
atgaactggaatgctctagaatgggacagagcagcagaggagctcacctgggagaggatg
cttggactggatggctccttggtgttcttagagcatgtgttctgggttgtgtctctgaac
actctcttcatcctggtgttcgcgttctgtccataccacattggtcacttctctgtcgtg
ggacttggctttgaggaatatgttcaagcttcccatttcgagggcctgatcacgaccatc
gtggggtacatcctgctggccatgacgctcatcctctgtcacgggtttgctgctctggtc
aggttccagaggtcccgccgtctactaggggtctgctatattgttgtcaaggtctctttg
ctggttgtcgtggagataggagttttccccctcatctgtggctggtggctcgacatctgc
tctttagagatgtttgatgcgtctctgaaggacagagagctgagttttaagtctgctcca
ggcaccaccatgttcctccactggctggtgggaatggtctacgtcttctacttcgcatcc
ttcatcctcctactgagagaggtgctgaggcctggggtcctgtggtttctgagaaacctg
aacgatccagacttcaacccagtccaggagatgatccacctacctatctacagacacatc
cgcaggttcatcctgtctgtggtggtgtttggttctatcgtcctcctgatgctgtggctg
cccatcaggatcataaaggtcttcctccctgccttcctcccctacaacgtcctcctctac
agtgatgccccagtcagtgagctctctctagagctgttgctgctgcaggtggttctgcca
gctctcctagagcagggtcacacacggcagtggctcaaaggtctggtcaggacctggact
gttagcgctggatacctactagacctccactcttacctgctgggtgaacaggaagacaat
gaggccaaccagcctgtcaacaacaacaacaacaacaaccctgctcccggtcaccataac
aacaaccctgctcccggtcaccataacaacaaccctgctcccggtcaccataacaacccc
gcccatgttgttggggaggggcttcatgcagcccatcaggccatattacagcagggtgga
cctataggcttccaaccctaccaacgccctctacgcttcccctttaggatcgtcttgctg
ataggctttatgtgtgtcactctgctgttggccagcctggtgtgtctgacgttaccagtt
tttgcgggccgttggctgatgtcgttctggacgggtagcgctaagatccatgagctgtat
acagcagcgtgtggtctgtacgtgtgctggctgtccatccgcggtgccactgtgctgttg
gcctggatgccccagggacgcaccatcatcatgatcaaagtccaggagtggaccctcatg
attctgaagaccctggtagtagcattgctggtggcaggtgttattcctctactgctgggc
ctgctgtttgagctggtcatcgttgctccgctacgcgttcctctggaccagacacctctc
ttctacccttggcaggactgggctctgggggtgctccatgccaaaatcattgctgccatc
accctcatgggtccccagtggtggctgaagtctgtcatagaacaggtgtatgctaacggc
atcaggaacattgacctccatttcattatccgtaagctggctgcccctgtcatctcagtg
ctgctgctgtccctgtgtgtcccctacatcatagcagccggtgtcgtacctaccgtaggt
gtgactccagggatgcagattctgatacagaggaggatctacccattcctcctgatggtg
gtgtccatcattggcatcctctccttccagatacgacagttcaaacgcctttacgaacac
atcaagaacgacaagtacctggttggccagcggcttgtcaactatgaacgcaaggcaagg
ggagccagctctgtcccgccccctaaccatatcccagagtag
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