Salvelinus namaycush (lake trout): 120027858
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Entry
120027858 CDS
T07522
Name
(RefSeq) zinc finger CCHC domain-containing protein 2-like isoform X1
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
120027858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
BLTP1_mid
Motif
Other DBs
NCBI-GeneID:
120027858
NCBI-ProteinID:
XP_038828864
UniProt:
A0A8U0TTP5
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Position
Sna33:33051858..33139051
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AA seq
1132 aa
AA seq
DB search
MLKTKLPMRTAEAGDDTAEEQPDLHIPRSVSPTISDRLEDSSRHPGYPSQLDKETVFEWF
GLHLNPAKRIELMCGLLHMCQPLELRFLGSCLEDLARKDYPILRDVEIRANCPNDLGILS
DVIDPVVRSKLLVCLSLLRSDSRECAGILFRILSHMDPALFYKNYPGYSVSPFRDPLHPS
CVDGKAFRRTDHICGRPMEAAVGPLEQLALLFTMASLHPAFPFHQRETLLVQLDKIELAT
EDRQQNQYRINAQAQKAEYLGPAAVTTEASLDERTQGQRQCASQTPPSCTTQQGSRTQRE
AVHIEKIVLKGMSQSRTDREYNFEVKWSDSSSSNVRKTQLELEGFLLKLPKEHSTESFEK
GILRLLNQGDKYESRGVERNLKEKFLSAPQAFRQTRKVCGFFLCESSSSSSCSCSRCNPA
ALGKPFKEDGSEASSQEEVVYLDPYVQGHRKKHVSNSPCLSIPDAKSSQGESIQKGSHSS
KHNSLPDWRRKTCTLQPDQEASGGPGPEQHQDSEKRANHPASMRQPLGPDRWDRAVCSVM
AIASSVDLLGREKGKKAYLANGSMVPPASQRARQSTGKGISDKLTRSGRAEQAERGGRKG
PDRQSRDYGDSSHEVYGETSSESYSSASSPQHHKPESLDSEDEKDKDTGSSQGPADAFFP
WQEVVDGAMPPIHHLVSAKPVGEPPSLDYPPNTFMHPLPCILPNRALPADAPLPVMPPQV
AAALVDNKVVGGLIMQVPLVLREPMSTTVPGDPEQRDAPAAVPMVLPGFGSLALGVHPPG
SPALLPLVQHFKTAPPQTTASSEGVTTLPAYQPLVEAISVITPGPPYASPLQPAYSNPDP
ASPLTPSVPLGDLSIPHTKHPDVSLFSGLPSLYTMAPIPTSVMATLGVAPSPGQVQAVVP
PSVPTHTPGPAPGSTQTDSTSYVNSTSNSVAQQQAQPQHQQQQQQQTTHQQQAMCCGACG
CRGGCGNSRTAPSFFFPHQMAPRQVFGAPPIFQFTSLCTSNYLSQPPPQSNGQAQLTFFP
PAPYAGQTLLHTHPHSDLGTQLGYSLQQMVSPFNRFYPHIYPSSVGMVPGSGGLGGAVGV
NKNNGNVSCYNCGVSGHYAQDCKQPSVDSTQQGSFRLKYATSHSSEGLDNAS
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaacgaagctgcccatgagaaccgcggaggcaggagatgatacggccgaggaa
cagccggatctccatattcccagatcggtctctcccacgatctcggacaggctcgaagat
tcatccagacacccaggatatccatctcaattggacaaagagaccgttttcgagtggttt
ggtttgcatctaaatcctgccaagcggatcgagttaatgtgcggactgctgcatatgtgc
cagccgctcgaactccggtttttgggctcctgtctggaagacttggcacggaaagattac
ccaattctacgggatgtcgagatcagagcgaactgtccgaatgatttgggcattttatct
gatgttatcgacccggtcgtgcgctccaaactgctggtctgcttgtcccttctgcgatct
gacagcagggagtgtgcgggaatactatttcggatattgagccatatggatcccgccttg
ttctacaaaaactatcccggttactctgtttctcccttcagggacccgctccatccttcg
tgtgtggacgggaaagcgttcaggagaacagaccatatttgcgggcgtccaatggaggca
gcggtcggacccttggagcagttggcgctgctttttactatggcctcattgcacccagcg
ttcccttttcatcaaagagaaacccttctagtgcagctggacaaaatcgaacttgccaca
gaggatagacagcagaatcagtacagaataaacgcccaggcccagaaagcagagtacctg
ggcccagctgccgtcaccactgaagccagtctggatgagaggacacaggggcagagacaa
tgtgccagccagacaccccccagctgcacgacccagcaaggaagcagaacccagagggaa
gctgtacatatagagaagattgtactgaaggggatgtcacagagcaggacagacagggaa
tacaattttgaggtgaagtggtctgactcctcatccagcaatgtcaggaaaacacagctt
gaactggagggcttcttgttgaagcttcccaaggagcactccaccgagtcgtttgagaag
ggcatcctccggctgctcaaccagggagacaagtacgagagcaggggggtggagaggaac
ctcaaggagaagtttctgtcggctccacaagctttccgacagacaaggaaggtctgtggc
ttcttcctgtgtgagtcctcctcttcctcctcctgcagctgcagcagatgtaaccctgca
gccctggggaagcccttcaaggaggacggttctgaggcatccagccaagaggaagttgtg
tatttggatccgtacgttcagggacaccggaagaaacatgtcagcaatagcccctgcctt
agtattcccgatgccaaaagttcccagggcgagagcattcagaaggggtcacacagctcg
aagcacaacagcctgcctgactggaggaggaagacctgcacgctacaacccgaccaggag
gcctctggggggccaggcccagagcagcatcaggatagtgagaagagggccaaccaccct
gccagcatgaggcagccactgggaccagacagatgggatagggcagtgtgcagtgtgatg
gcgattgcatcgtctgtggatctgttggggcgggaaaaggggaagaaagcatacttggca
aatgggagcatggtgccaccagcatctcagcgagcgcgacagtcgacaggaaaaggcata
agcgacaaactcaccagaagcgggcgggcggaacaagcagagcgaggcgggcggaaagga
ccagacaggcagagcagggactatggagactccagtcacgaggtatacggcgaaacctcg
tctgagagctacagctcggcctccagcccccagcaccacaaaccagagagcctggacagc
gaggacgagaaggataaagatacgggcagtagccagggcccagcggacgccttcttcccc
tggcaggaggttgtagatggggccatgccccccatccaccacctggtctctgccaagcct
gtcggggagccccccagccttgactatcccccaaacaccttcatgcaccccctgccctgc
atattgcccaacagggcactacctgccgatgcccctctgccagtcatgcccccccaggtg
gcagctgccctagtagacaacaaggtggtcggagggctgatcatgcaggtgcccctggtc
ctccgagagcccatgtccaccaccgtgccaggggatccagagcagagggatgctcctgct
gcagtgcccatggtactcccagggtttggctccctagccctaggcgtacacccccctggc
agccctgccctgctgcccctggtccagcacttcaagacagcccctccacagaccactgcc
agctctgagggtgtcaccaccctccctgcctaccagcccctggtggaagctatcagtgtc
atcacccccggtccgccctatgcctcacccctgcagcctgcctactccaacccagaccct
gcctcccccctaaccccctccgtacccctgggggaccttagcatccctcacaccaagcac
ccagatgtgtctcttttctcgggcctgccctccctgtacactatggcccccatccccact
tccgtcatggcaacgctaggggtagcgccttcccctggacaggttcaggcggtggtgccc
ccgtccgtacccacccacacccccggcccagcgcccggctcaacccagaccgactccacc
tcttacgtcaacagcaccagtaactccgtcgcccagcaacaggcgcaaccacaacatcaa
caacaacagcagcagcagacgactcaccagcaacaggccatgtgctgtggggcgtgcggt
tgccgaggcggctgcggcaacagccgtacagcgccatcgtttttcttcccccaccagatg
gcgccacggcaggtgtttggtgcgccgcctatcttccagttcacgtccctgtgcaccagc
aactacctcagccagccgcccccgcaaagtaacggccaggcccagctgacattcttcccc
cccgccccttacgctggccagaccctgctgcacacccaccctcactctgacctgggcacc
cagctaggctatagcctccaacagatggtgtcgcccttcaaccgtttctacccgcacata
tacccctccagcgtgggtatggtgcccggttcgggaggcctggggggagcggtcggcgtc
aacaagaacaacggcaacgtctcctgctacaactgtggggtcagtgggcactacgcacag
gactgcaaacagccctccgttgattcaacacagcaaggcagctttcggctgaagtacgcc
acctcccactcttccgaaggactagacaacgctagctga
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