Salvelinus namaycush (lake trout): 120028011
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Entry
120028011 CDS
T07522
Symbol
fen1
Name
(RefSeq) flap endonuclease 1 isoform X1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03030
DNA replication
snh03410
Base excision repair
snh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120028011 (fen1)
03410 Base excision repair
120028011 (fen1)
03450 Non-homologous end-joining
120028011 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snh03032
]
120028011 (fen1)
03400 DNA repair and recombination proteins [BR:
snh03400
]
120028011 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120028011 (fen1)
DNA replication proteins [BR:
snh03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
120028011 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
120028011 (fen1)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
120028011 (fen1)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120028011 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
120028011
NCBI-ProteinID:
XP_038829052
UniProt:
A0A8U0PQ66
LinkDB
All DBs
Position
Sna33:complement(35678401..35683031)
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AA seq
386 aa
AA seq
DB search
MLRRATMGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAIDASMCMYQFLVAVRQDGNVLQ
NEDGETTSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQA
QEAGEQENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFA
TATEDMDGLTFGTGVLLRHLTASEAKKLPIQEFQFTRLLQDINLTHEQFIDLCILLGCDY
CGTIKGIGPKRAIDLIRQHGSIEEILENIDPSKHPAPEDWLYKEARGLFLQPDVVDCSTV
DLKWSEPDEDALIQFMCAEKQFSEDRIKNGCKKILKSRQGSTQGRLDTFFTITGSLSSKR
KEPETKGSNKKKQKTGATTGKFKKGK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtcgagccaccatgggaattcacgggcttgcaaagttgattgcagaccaggca
ccatctgctataaaggaacaagacattaagaactattttgggcggaagatagcaatagac
gcctccatgtgtatgtatcagttccttgtcgctgtcagacaggatggtaatgtgctacaa
aacgaggatggagagaccacaagccatctcatgggcatgttctaccggactatccgcatg
ctggagcacgggatcaagcctgtctatgtgtttgatggcaagcccccacagctgaagtca
ggagagctggagaagagaggagagaggagggctgaggctgagaaactgctggcccaggca
caggaagcaggggagcaggagaacattgataaatttagtaaacgactggtgaaagtcacc
cggcaacacaacgacgagtgcaagaagctgctcaccctgatgggggtgccatacatcgag
gctccgtgtgaggctgaggcgagctgcgctgctctggttaaggctgggaaggtgtttgcc
actgcaacagaggatatggacggtctgacttttggaacaggggtcctactaaggcacctc
actgccagcgaagccaaaaagcttcctatccaggagttccagttcactcgccttttgcag
gacattaatctgactcatgagcagttcatagacctgtgcatactgctgggctgtgactac
tgtggtaccatcaagggaatcgggcccaagagagccattgacttgatcagacaacacggc
tccatcgaggagattctggagaacatcgacccgtctaagcaccctgccccagaggactgg
ctgtataaggaagccagagggctgttcctgcagcctgacgtggtggactgctccaccgta
gacctcaagtggagcgagcctgacgaggacgccctcatccagttcatgtgtgcagagaaa
cagttcagtgaggaccgcatcaagaacggctgtaagaagattctgaagagccggcagggc
agcacacagggacgactggacaccttcttcaccatcaccgggtctctgtcatcaaaacgc
aaggaacctgagacaaagggatccaacaagaagaaacagaagaccggtgcaaccacaggc
aaatttaagaagggaaaatag
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