KEGG   Salvelinus namaycush (lake trout): 120028033
Entry
120028033         CDS       T07522                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    120028033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:snh03400]
    120028033
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     120028033
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st EIF3I Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 WD_LRWD1 WDR54 RAWUL Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 120028033
NCBI-ProteinID: XP_038829091
UniProt: A0A8U0PNF0
LinkDB
Position
Sna33:complement(25658153..25675546)
AA seq 690 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKSECVLLKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQLSFPAQCLS
GSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPELR
MLVCEEKAPVLKMELDRSADPPTALWVSTTKSTVNKWSLKGIHNFRASGDYDNDCTTPLT
PLCTQPEQVVKGGASIIQCHILNDKRHILTKDTNNNVAYWDILKACKGEDLGKMEFDEEI
KKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGADPKLNLGGLLL
QALLEYWPRTHVNPMDEETEMNHVNGEHESRIQKGNGYFHVPPHTPVIFGEAGGRTLFRL
LCRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSAS
DMLQVRKVMEHVYEKIINLDNESQTGASGNNDKPSEQQKEEEDVAVLAEEKIELLCQDQV
LDPNMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggcgactcatcacaggcagaatgctgctgggcggagaaaagtccaggtatcctatgtg
attagggatgaggtggagaagtataaccgcaatggggtgaacgccctgcagctcgacccg
gccttgaaccgcctcttcacagctggccgagactccatcattaggatatggagcgtcaac
cagcacaagcaggacccgtacattgcatcgatggaacaccacacggactgggtcaatgac
atcgtcctctgttgcaatgggaagacattgatatctgcttcctcagacaccacagtgaaa
gtctggaatgcgcataagggattctgcatgtccacattgcgaacacacaaggactatgtc
aaagccttagcctatgccaaggacaaggagttggtggcctcagctgggctggacagacag
atcttcctatgggacgtcaacacactaacagcactgactgcctccaataacaccgtcacc
acctcctcactgagtgggaacaaagactccatctacagtctggctatgaatcagatgggc
accgtcattgtgtcagggtccaccgaaaagagtgaatgtgtccttttaaaggtactgaga
gtttgggatcctcgaacctgtgccaaactgatgaagttgaaaggccacacagacaacgtc
aaatcattactgctaaacagggatggcactcagctctcttttcccgcccagtgtctctcg
ggcagctcagacgggaccatccggttgtggtcgctggggcagcagcggtgcatcgccacc
taccgtgtgcacgatgagggcgtatgggccctacaggtcaacgaggccttcacacatgtc
tactctggtggccgcgaccgcaagatctactgcaccgacctgaggaacccagagctccgt
atgctcgtctgtgaggagaaggcccccgtcctcaagatggagctggaccgctcagctgac
ccccccacggccctctgggtctccaccaccaagtccaccgtcaacaaatggtctctgaag
ggcattcacaatttccgagcatctggagattacgacaacgactgcactactcccctgacg
cctctctgcacacagcccgagcaggttgttaaaggcggagccagcattattcaatgccac
attctgaacgacaagagacatatactaaccaaagataccaacaacaacgttgcatactgg
gatattttaaaggcgtgtaaaggggaagacctgggaaagatggagtttgacgaagagatt
aaaaagaggtttaaaatggtgtatgtgccaaactggttctctgtggatcttaagactggg
atgttgaccatcacgctggatgagagtgactgctttgctgcgtgggtgtcggccaaggat
gcaggcttctccagtcctgatggggctgatcccaaattgaacctgggtggactgctgctg
caggccttactggagtattggccccggacacacgtcaaccctatggatgaagaaaccgag
atgaaccatgtgaacggggagcatgagagcaggatacagaaaggtaacggctacttccat
gttccccctcacacgccagtcatctttggagaggcagggggaaggaccttgttcaggttg
ttgtgtcgagactcaggtggtgaaactgagtccatgttgctcaacgagaccgtgccacag
tgggtcatcgacatcaccgtggataaaaatatgcccaaattcaacaaaatcccattctac
ctccagcctcattcttcctctggtgcaaaaaccttaaagaaggaccgtctgtcggccagc
gacatgctccaggtgaggaaggtgatggagcacgtatacgagaagatcatcaacctggac
aacgagtctcagacgggggcctcggggaacaacgacaagcccagcgagcagcagaaggag
gaggaggacgtggccgtgctggccgaggagaagattgagctgctctgtcaggatcaggta
ttggatcccaacatggacctgcggacggtcaagcattttatctggaagagcggcggagac
ctaacccttcactatcggcagaagtccacgtga

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