Salvelinus namaycush (lake trout): 120028035
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Entry
120028035 CDS
T07522
Name
(RefSeq) zinc finger homeobox protein 4-like
KO
K09380
zinc finger homeobox protein 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120028035
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120028035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
zf-C2H2_4
Homeobox_KN
zf-C2H2
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_11
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
120028035
NCBI-ProteinID:
XP_038829101
UniProt:
A0A8U0PR52
LinkDB
All DBs
Position
Sna33:28526363..28573648
Genome browser
AA seq
2535 aa
AA seq
DB search
MGSYGEEPCDDEAPLPPRSSSRPGLNDRELADREHRVNSLSKESPGSNAVGKRSMLTERQ
NDSPPKRPKSAEGKTSVNEQQVQQCPYCNYSSKDANRIQLHVVSQHSMQQPVISCPLCQD
VLSNKIHLQLHLTHLHSVAPDCVEKLLMTVAGPDVMVPNNMMHPSPGQDNALSLMDASAV
LSEKYRKPTGNSSKEEMNSTGQGKSELDLHGEEHKPPKDGSEAPDWKRSVVIGQDRKSPD
SLQDHLNDLQRCQQQQQQLSVSDRHVYKYRCNHCSLAFKTMQKLQIHSQYHAIRAATMCS
LCQRSFRTFLALRKHLENGHPELSEAEVQQLCGSLQVNGDFLSESEARAYEEAQQAFEQE
MEKDDELDLEEKASPTGSDSSSLLDDMGAETKRTLPFRKGPNFTMEKFLDPSRPYKCTVC
KESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPAETNNNVDNKPFKCNICNVAYSQSS
TLEIHMRSVLHQTKARTAKTETSSSSSSGGSGNTSGVAPCSSPAPNVQGNNTNSDTARSV
TPSANKENTVDAKEAKNSSNNAKQTTDHVSAQQSHQNAQSQAQLQMQLQHELQQQAAFFQ
PQFLNPAFFPQFGMTPEALLQFQQPQFLFPFYIPGAEFNLSPELALHSAAAFGMPGLTGS
FLEDLKQQMQQQHQLQQAQAQQQAQAQQQAQQQQQQASQLQLQQQKNQQLQSHKPKMEPN
AVSVSDIQMSREAEEHLEKQESKAKMENGGDGVSEGGKDNKDKKSKFPEPLIPPPRIVSG
ARGNAAKALLENFGFELVIQYNENRQKNQKKNKEGEQQQQSQKVEINNDKLECGICGKLF
SNMLILKSHQEHIHGQFFPYGELEKFAQQYREAYDKLYPINPPSPETPPPPPPPPPPPPA
PVTTQQAPSNSMSKPQIQAPSPAPQQATQPQPPLPPPPPPPPSAPPQVSPSSVPLDFSLF
PPLMMQSIQHQGLHPQLALQLPTMDSLSSDLTQLCQQQLGLDPNFLRQSQFKRPRTRITD
DQLKVLRAHFDINNSPNEEQIQEMADKSGLPQKVIKHWFRNTLFKERQRSKDSPYNFNIP
PITTLEDIRLESQYSTLEYYRTDATLNKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQ
LSTVLNLPSRVIVVWFQNARQKARKSYENQADAKDNEKKELTNERYIRTNNMQYQCKKCS
VVFPRIFDLITHQKKTCYKDEDEEGNEDNQSEEYMDMGEPGPAKHPESSKHHHVTATSSG
SSSPLMPSPRPNLGKTSPKPEPPSEPKPKEPEPAPSPVMMKSLPEPRPSKASTPQPPPQK
TSQPQMSRPHSQPQSAAIPSSPLSLALSSLTNSLPPQMLQYQCDQCKIAFPSVELWQEHQ
HMHFLAAQNQFLHSQFLERPMDMPYMIFDPNNPLMTSQLLSGGLQMPIQSGSGLSSGPGS
GSMKRKLDEKEDGSNEKDNGNMTEEQHRDKRLRTTITPEQLEILYDKYLLDSNPTRKMLD
HIAREVGLKKRVVQVWFQNTRARERKGQFRALGPSQSHKKCPFCRALFKAKSALDSHIRS
RHWHEAKQAGFSLPNSPLMNQDDGGESPHKYNFFEYPQLPTKTEPNEYELPPASSTPVKP
SEAPLKNLLSPSSLKAENCDESEGLNINSAEASSYDINNKMDFDETSSINTAISDATTGD
EGNNELESLTANGGDKLGCDSKSNQAQSSDGGGDDRFPFSMVSPSLSYSGKDGDSCSYSY
SYYSSRDDDMDDNNDQSETSSLTDPSSPSPFGSGNPFKSGKGSGSGGDRPGHKRFRTQMS
NLQLKVLKACFSDYRTPTMHECEMLGSEIGLPKRVIQVWFQNARAKEKKFKINIGKPFMI
SQGGPDGPRPECTLCGVKYTARMSIRDHIFSKQHIAKVQETLGNQVDREKDYLTPTTVRQ
LMAQQEMDRLKKAGSDGFSSLAAQQLQTAMDQNNALHGLSLPSGYPGISGLPPVLLPGVN
GPSSLPVYPPNTPALASPGAGMLGFPTPATPSPAMSLSTTPTKTLLQTPPPPPPPPPPPP
PVSSIPLTSTNHIEQHRKYQERDSNNSSSKKSVEKPHHQKKAKEREAENGGRPQTPNVSH
NKKREKPYPAMGKPGSEGHLDAAQLQALQNALAGVTDPSSFLGGQFLPYFLPGFANSFSP
QLLGGMQAGGYFPPFGGIENLFPYGPAAIPQAAMAGMNPTALLQQYQQYQQSLQDSLQKQ
QQQQQQQQLEQQHQHHKQQQQKQKQKPIPVKVSLPCVQSNSNSFKPKESMDDTNNNKGSL
TESTKVESPTETKSTTDFPDAFIVPSVKHEFICRKCHKVFGDEGSAVHHQKSFCYFGNPF
PDPQETVLRQAVSKYTCIACNVVVNGNEALGQHLQSSLHKEKTIKQAMRNAKEHARLLPH
SVCTPAPVNTTSTSQSAAPPSNNTFPHLSRLSIKSWPNILFQASARKASSSSSSSPSASP
LPLPPLSLPLMVTSTSCSSVSGVPTSLPNKNCSDESDNELSQKLDDLDKVLEAKAKPTSG
LDAGFSSIRMDMFSV
NT seq
7608 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttatggagaagagccatgtgatgacgaagccccccttcctccccgctcttcc
tccaggcctggcctcaacgacagagagctggctgacagagaacacagagtgaactctctg
tctaaagagtctcctggatccaacgctgtgggaaaacgctccatgctgacagagagacag
aatgacagcccgcccaaaaggcccaagtctgcagaggggaagaccagcgttaacgagcag
caggtgcagcagtgcccctattgtaactacagcagtaaagacgccaacaggatacagctc
cacgtggtgtcccagcattccatgcagcagccagtgatcagctgcccactgtgccaagac
gtcctgagcaacaagatccacctgcagctccacctcacacacctgcacagtgtggctcca
gactgtgttgagaaactgcttatgaccgtggctgggcctgatgtgatggtgcccaataac
atgatgcatccttcacctggacaagacaacgctctgtctctgatggatgcttctgctgtt
ctctctgagaagtatcgaaagcccacagggaacagttccaaggaagagatgaacagcaca
ggccaaggcaagagtgaactagacctccatggagaggaacacaaaccccccaaggatggg
tctgaagccccagactggaagaggtctgttgtgatcgggcaggatcgaaagagccctgac
tccctccaggaccatctgaatgacctccagagatgccagcagcaacagcaacagctctcg
gtctccgaccgccacgtctacaaataccgctgcaaccactgcagcctggccttcaagacc
atgcagaagctgcagatacattcccagtaccatgccatccgggcggccaccatgtgcagc
ctctgccaacggagcttccggacattcttggcgctccggaagcacttggagaacggacat
ccggagctgagcgaagccgaggtccagcagctctgcggcagcctgcaggtaaacggagat
ttcctctccgagagcgaggccagggcctacgaggaggcccagcaggccttcgaacaggaa
atggagaaagacgatgagctggatctggaagagaaggccagcccaacaggaagtgacagt
agctcgttgctagatgacatgggagccgaaactaagcgaaccctccccttcaggaaaggc
cccaacttcaccatggagaagttcctggacccgtcccggccgtacaagtgcacagtgtgt
aaggagtccttcacccagaaaaacatcctcctggtccactacaactctgtctctcacctg
cacaagctgaagaaggttctccaggaggcctccagcccggttcctgcagagaccaacaac
aatgtagacaacaaaccattcaaatgcaatatctgcaatgttgcctacagccaaagctca
accctggagatccacatgaggtctgtgctgcatcagaccaaagctagaactgccaaaaca
gagacaagcagcagcagtagcagtggagggagtgggaacactagtggtgtggctccatgc
agtagcccagccccaaacgtacaaggcaacaacaccaactcagacactgctagaagcgtg
acgccgtcggctaacaaagaaaacactgtagatgccaaagaagccaaaaacagcagcaac
aacgcaaagcaaactactgatcatgtctctgcacagcaaagccatcagaacgctcagtcc
caagctcagctacagatgcagctccaacacgagctccagcagcaggctgcctttttccag
ccccagttccttaacccggctttcttcccccagttcggcatgaccccagaggctctgctt
cagttccagcagccacagttcctgttccccttctacatcccaggggcagaattcaacctg
agcccagagctggctcttcactcagccgccgctttcggaatgccaggattgactggttct
ttcctggaagacctgaagcagcagatgcagcagcaacaccagctacagcaggctcaggct
cagcagcaggctcaggctcagcagcaggctcagcaacagcagcaacaagcatcccagttg
cagctccagcagcagaaaaaccagcaactgcagagccacaagcccaaaatggagcccaat
gctgtgtcagtgtctgacatacagatgtccagagaggcagaagagcatctggaaaaacaa
gagagcaaagcaaagatggagaatggaggggatggagtcagtgagggaggaaaggacaac
aaagacaaaaagtccaagtttcccgagccactgattcctcctccacgtatcgtgtcagga
gccagaggaaatgcagccaaggcccttctggagaactttggatttgagctggtcatccag
tacaatgaaaacaggcagaaaaaccagaagaaaaataaagaaggagaacaacaacaacaa
tcgcaaaaagtggagatcaataacgacaagctggaatgtgggatatgtggaaagctcttc
tccaacatgctcattctcaaaagccaccaagagcacatccatggacagttcttcccttat
ggagagctggagaagtttgcccagcagtacagagaggcctatgacaagctttaccccatt
aaccccccttccccagagactcccccacctccgcctccccctcctcctcccccaccagcc
ccagtgaccacccagcaagctccctccaactccatgagcaagccccagatccaggcccca
tcccctgcccctcaacaggctacccagccccagccaccactcccacctccccctcctcca
ccgccctctgcacccccacaggtttctccctcttccgtcccactagatttctcccttttc
ccccctctgatgatgcagtccatccagcaccaagggttacaccctcaactcgccctgcag
ctgcctacaatggactccctgtcctctgatctcacccagctctgtcagcagcagttaggc
ctcgatccaaacttcctgaggcagtcccagttcaagcgcccccgaacccgcatcacggac
gaccagctgaaggtcctcagagctcactttgacatcaacaactcgcccaatgaggagcag
attcaagagatggccgacaagtccggcctcccccagaaagtcatcaagcactggttccgt
aacaccctctttaaagagaggcaacgaagcaaagattctccttataacttcaacattcca
cctattaccacattggaggatattaggctggagtcccagtatagtacactggagtactac
aggactgatgccactttgaacaagaggtcctccaggacaaggttcactgactaccaactg
agggtcctgcaggacttctttgacacaaacgcttacccgaaagacgatgagattgagcag
ctctccactgtgcttaacctgccatcaagggtcatcgttgtgtggttccaaaacgcccgc
cagaaggcccggaagagctacgagaaccaggcagatgctaaagacaacgagaagaaagaa
ctgacgaatgagcgctacatccgcaccaacaacatgcagtaccagtgcaagaaatgcagt
gtggtgttcccgcgaatctttgacctgatcacccaccagaagaagacgtgctacaaggat
gaggatgaggaagggaatgaggacaaccaatctgaagagtacatggatatgggagagcca
ggcccagctaagcacccagagtcatccaagcatcatcatgtaacagccactagctcaggc
tccagctcccctctgatgccctcccctcgccccaacctggggaagacctcgcccaagcct
gaacctccctctgagcccaaacctaaagagccagaacctgccccttccccagttatgatg
aagtctctaccagagcccagaccctccaaggcctccacccctcagccaccccctcagaag
acctcccagccccagatgtccagaccccactcccagcctcagtcagccgccatcccctcc
agccccctctccctcgccctctcctccctcactaacagcctccctccccagatgctccaa
taccagtgcgaccagtgcaagatagccttcccaagtgttgagctatggcaggagcaccag
catatgcatttcttggctgcccagaaccagttcctccattcccagttcttggaaaggccc
atggacatgccttatatgatcttcgaccccaataatcctctgatgactagccagctgcta
tcgggaggactccagatgccaattcaaagcggctctggtttgtcctcaggccctggctct
ggctccatgaagagaaaactagacgagaaagaggatggatccaatgaaaaagataacgga
aacatgactgaagaacagcacagagacaaacgtctcagaactaccatcaccccagaacaa
ctagagatcctctacgacaaatacttgctggactcaaatcccacaaggaagatgctggat
cacatcgcccgtgaggtcggcctgaagaagagagtggtgcaggtgtggtttcagaacaca
cgcgcccgagagagaaagggacagttcagagctttggggccctcccagtcacacaagaaa
tgccctttttgccgggcgctgttcaaggccaagtcagctttggacagccatatccgctct
agacactggcatgaagccaaacaggcagggtttagtctgcccaatagcccactgatgaac
caagacgatggaggcgagagcccacacaagtacaacttctttgagtatccacagctaccc
accaagactgagccgaatgagtacgagctgcccccagcctcctcaacgccagtcaaacca
tctgaggcaccgttaaaaaacttattgagcccttcatccttaaaagcagaaaattgtgat
gaatctgaagggcttaacattaattctgcagaggcctcatcctacgacatcaacaacaaa
atggactttgacgaaacctcgtccatcaacacggccataagtgacgccacaaccggagac
gaaggcaacaacgagttagagagcctcacggccaatggaggggacaagctgggatgcgac
agcaagagcaaccaggcccagagctctgacgggggaggcgatgaccgcttccccttcagc
atggtgagcccctcccttagctactcgggcaaggacggagactcctgctcctactcctac
tcctactacagctccagagatgacgacatggacgacaacaacgaccagagcgagacctcc
agcctgaccgaccccagctctcccagccccttcggaagtggaaaccccttcaagtctggg
aagggcagcggcagtggtggcgatagaccaggccacaagcgcttcaggactcagatgagc
aaccttcagctgaaagtcctcaaagcttgctttagcgactaccgcacaccaaccatgcat
gagtgtgagatgctgggcagcgagattggcctccccaagcgcgtgattcaggtgtggttc
cagaatgcccgcgccaaggaaaagaagttcaaaatcaacatcggaaagccattcatgatc
agtcaaggcgggccggatgggccccggccggagtgtactttgtgtggtgtgaagtacact
gcccggatgtccatccgcgaccacatcttctccaaacagcacattgctaaagtgcaggag
actctgggcaaccaggtggacagagagaaggactatctaacgcccaccacggtccgtcag
ctgatggctcagcaggagatggatcgtctgaaaaaggccgggagcgacgggttcagcagc
ctggccgcccagcagcttcagactgcaatggaccagaacaatgcacttcacggcctcagc
ctgccctcaggctaccccgggatctctggacttccgccggtactacttcctggggtcaac
gggccgtcctcacttcctgtttacccacccaacacacctgctttagcgtctcccggtgct
ggtatgcttgggttccccaccccagccaccccctctcctgccatgtctctcagcactacc
ccaaccaagactcttctgcagactcctccacctcctcctcctcctcctcctccacctcct
cctgtttcctccatccctctgacttcaaccaaccacattgagcagcacagaaaataccaa
gagagagacagcaacaacagcagcagcaagaaatcagtggagaaaccgcaccaccagaag
aaggcaaaggaaagagaagcggagaatggcggccgtccacaaacccccaacgtcagccac
aacaagaagagggaaaagccgtatccagccatgggcaaaccaggaagtgagggccatctg
gatgccgctcaactgcaggctcttcagaacgccctggccggcgtcacagacccaagctcc
ttcctgggaggccagttcctgccttacttcctcccgggcttcgccaacagcttttcgccc
cagctccttggaggaatgcaggccgggggatacttccctccattcggcgggatagagaac
ctattcccatacggacctgctgccatcccgcaggccgccatggcggggatgaatcccact
gccctcctgcagcagtatcagcagtaccagcagtctctccaggactccctgcagaagcag
caacagcagcagcagcagcagcagcttgagcaacaacatcagcatcataaacagcagcag
cagaagcagaagcagaagccaatccctgtgaaggtgtctttaccatgtgtgcagagcaac
tccaactccttcaaaccaaaagaatctatggatgacaccaacaacaacaaaggctctttg
acagaaagcacaaaagtagaatcgccaacagaaaccaaaagtaccacagactttcctgac
gctttcattgttccatctgtcaagcacgagttcatatgcaggaagtgccataaggtattc
ggcgatgagggctccgcagtgcatcaccagaagtcattctgctacttcggaaaccccttt
ccagacccgcaggagacagttcttagacaggcagtgagcaagtacacgtgcatcgcctgt
aatgtggtggtcaacgggaatgaagcacttggccaacacctccagtcgagcttgcacaaa
gagaaaacaatcaaacaagcaatgagaaatgccaaagagcatgctagattattacctcac
tctgtctgcacccctgctcctgtcaacaccacatctacctcgcagtctgcagctcctcct
tctaataacacctttccccatctctctcgcttatccatcaagtcctggccaaatatcctt
ttccaggccagcgcccggaaagcttcttcttcctcctcctcctccccgtctgcttctcct
cttcctcttcctcccctttccttgcctctaatggttacctcaacgtcctgcagcagcgtc
tcaggggttcccacctccctacccaacaagaattgttcagatgagtctgacaacgagcta
agccagaagctggatgacttagataaggtgttggaggccaaggctaagccaacctccggc
ttagacgcaggcttcagcagtatcagaatggatatgttcagtgtgtag
DBGET
integrated database retrieval system
