Salvelinus namaycush (lake trout): 120028074
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Entry
120028074 CDS
T07522
Name
(RefSeq) condensin-2 complex subunit G2-like isoform X1
KO
K11492
condensin-2 complex subunit G2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120028074
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
120028074
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensin2nSMC
HEAT
PDS5
VPS15-like_hel
HEAT_2
CLASP_N
Cnd1
Adaptin_N
HEAT_EZ
HEAT_GCN1_C
TPR_TRIP12_N
TIP120
ARM_TBCD_2nd
DUF2729
Motif
Other DBs
NCBI-GeneID:
120028074
NCBI-ProteinID:
XP_038829154
UniProt:
A0A8U0TVJ0
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Position
33:complement(5933337..5947002)
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AA seq
1082 aa
AA seq
DB search
MSKREAFLDSICKDNVGEFLNFTKLHKDTAEPFDLDEVLQELPKGQREALWARLVTLLCD
QLAAFAPEHWDAGLEEDNDMEVVSPDRTHTMSVLEGVTLVVKASVDVIEDGDTYNSLLEC
GNILNGVLPYLPASEMPLRQAIHGLCEAWWKKGLLGKEALGRTAFLGSLEKTLILKKPGA
EIQRLWGFHEVLFTVDFASECSKELIDLLLQCFLSVNHIKNEDGKRLMVFLFSWNVNFIQ
MIHGTIKNQLPYFAKPHTDHIAEIYCRAWKKASGVCLEQIESTCIQDLMQHAVLLHRTSP
VHAKVRQILSYFHKRKGRHGLDEMLYRLYKPILWRALSAANSEVRANATLLFTEAFPIHN
PSQNSEKMDETIQKQLDTLVRLLEDPQPLVRSTATLGVCKILAKCWEVIPPTVITDFLKK
IVVELANDTTSPDVRCSVFKCLTIVLDNGHSHPLLEQLLPALKNSLHDTSEKVRVAFLNM
LLKIKAVRAAKFWKVSSMDHLLARLAVDSQPVSKRIVNLLFNSFFPVNQSVEVWCERCVT
LIQMNPKAARTFYQYAHIYTAPTNIVKLMLTIRRCLNACIQTEDLNETNSNKENTSVLEH
VLSVKDTAAMASLLEVVVILWRSIRKALELNKDALQYTTAKFGSVVPKYFNVFQEERCTV
PLIQLASLLPPASVPTFSCGVLSRLKRLEAGAKVSQYSQIIECLCSWGQAAHVLELITDW
LTDALPTPAGKGNTSRKVRIQETVEAKPDLGLDYLEYLVSRTSTRDCILPFRQGQLKQLH
KALGAWKSVLLSHMSSSEAQANVPRAETALRAFALHARLSAHVQHKFSEGRDFLVPVENM
AAWVAERVLPFLVGPSEGGVTEQQRDLAKQVVECLLTVSKDVIRVGLGDEEFKGQVLHLC
SIVLLSEKGYLCVPLLLSVLTEVAENYVPENQAQDNQSSIILTVVTNVFQKILEVMARRL
RKDPEEGQEISHPQEVITPETVQDLPPLSSILLTVLLKSPPVTRAFLAEIISTVDSEVID
GLTGLAAVLHILAVVRQTGKFKADLKSSAVSVDRQLQKHYAVTAEDEGHIQRVIYESAIN
TE
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgagaggcatttttagactccatctgcaaagacaatgtgggggaatttctc
aatttcactaaactccataaggacacggctgagccctttgacctagatgaggtcctgcag
gagctgccaaagggccagagagaggcactgtgggcccgactagtcacactactttgtgac
cagctggcagccttcgcaccagagcactgggatgctggcttagaggaggacaatgacatg
gaggtggtgtccccagaccggacacacaccatgtctgtccttgagggagtgactctagtg
gtcaaagcttctgtggatgtcattgaggatggcgacacctacaattctctcttagagtgt
ggcaacatattaaatggtgtcctgccttaccttcctgcctctgagatgcctctgcggcag
gctatccacggtctgtgcgaggcctggtggaagaaaggcctccttggtaaagaagcgctg
ggccgcacagccttccttggaagcctggagaagaccctcatcctgaagaaaccaggggct
gagatccaaaggctttggggtttccatgaggtgctgttcactgtggactttgcgtcggag
tgcagcaaggagctgatcgatctgctgctacagtgcttcctcagtgtcaatcacattaaa
aacgaagatggaaagcgtctgatggtcttcctctttagctggaatgtcaacttcatccag
atgatccatggaaccatcaaaaaccagctaccttactttgcaaagccccacactgaccac
atagctgagatctactgccgggcctggaagaaggcttctggggtctgtctggagcagata
gagagcacgtgcatccaggacctcatgcagcacgctgtgctcctgcacaggacctcgccc
gtccatgccaaagtcagacagatactgagctactttcacaaacggaagggccgccatggg
ttggatgagatgctttacagactctacaagcccattctctggagagcgctaagcgctgcc
aactctgaggtccgggccaatgccactctgctcttcaccgaggccttccctatccacaat
cctagccagaacagtgagaagatggacgagaccatccagaaacaactggacacgctggtc
cgcctgctagaggaccctcagcctctggtgcgctccacagccaccctcggggtctgtaag
atcctggccaagtgctgggaggtcatcccccccactgtcatcaccgacttcctcaagaag
attgtggtagagctggccaatgataccacctcccccgatgtccgctgctccgtcttcaag
tgtttgaccatcgtgctggacaatggccacagtcacccgttgctggagcagctgctgcca
gctctgaagaacagcctccatgacacctcggagaaagtacgcgtggccttcctcaacatg
ctgctcaagatcaaagcagtgcgagccgccaagttctggaaggtgtcctccatggatcac
ctgctggcccgtctggccgtcgactcgcagcctgtctccaagcgcatcgtcaacctcctc
ttcaattccttcttccccgtcaaccaatcagtggaggtgtggtgcgagcgctgcgtcact
ctgattcagatgaaccccaaggcagctaggactttctaccagtatgcacacatctacaca
gcccccactaacatagtcaagctgatgctgacaatccgccggtgtttgaatgcctgcatc
cagactgaagacctgaatgagacaaactcaaacaaggagaacacaagtgttctggagcat
gtcctgtcggtcaaggacacggcggccatggccagtctgctggaggtggtggtgatcttg
tggaggagcatccggaaagccctggagctcaacaaggacgccctccagtacaccactgcc
aagtttggctccgttgtgcccaagtacttcaatgtcttccaggaggagcgttgcacagtt
cccctcatccaactggcctccctactgcccccagcttctgtccccactttcagctgtggg
gtgctgtccaggctgaagaggctggaggcgggggccaaggtgtcccagtacagtcagatc
atcgagtgcctgtgtagctggggccaggctgcacacgtcctggagctcatcacagactgg
ctcactgatgccttacccacccccgctggcaaagggaacaccagtcggaaagtgcgcatc
caggagacggtggaggccaagccagacctggggctagattacctggagtacctggtcagc
cgtacctccacgcgggactgcatcctgcccttcaggcagggccagctcaaacagctgcac
aaagccctcggggcctggaagtcagtgctgttatcccatatgagctcttctgaggcccag
gccaatgtacccagagcagaaacagcactaagagcatttgcccttcacgcacgtctcagt
gcccatgtacagcacaaattctcggaggggagggatttccttgtccctgtggagaacatg
gcagcgtgggtggcagagagggtgctgcccttcctggtcggccccagtgagggaggggtc
actgagcagcagcgggacctcgccaagcaggtagtagagtgtttactgacggtgagcaaa
gatgtgatccgggtgggccttggggacgaggagttcaaagggcaggtccttcacctgtgc
tccattgtgctcctctctgagaagggctacctgtgtgttcctctgctgctctctgtgctg
acggaggtggcggagaactacgtccccgagaaccaggcccaggacaaccagtcctccatc
atcctcaccgtggtcaccaacgtcttccagaagatcctggaggttatggctcgccgcctg
aggaaggaccccgaggagggccaggagatttcacatcctcaagaggtcataacaccagag
acggtccaggatttgcctcctctctcaagcatcttgttgaccgttctcctcaaatcgccc
ccggtcacaagagcctttctggcagagatcatctcaactgtcgactcagaggtcattgat
ggtctgaccggattggctgcagttcttcacattctggcagttgtcagacagactgggaag
tttaaggcagatctgaagagttcagccgtgtccgtcgacagacagcttcagaaacattac
gctgtcacggctgaggacgaaggtcacatccagagggtaatctacgaatctgctatcaac
actgaatga
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