Salvelinus namaycush (lake trout): 120028240
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Entry
120028240 CDS
T07522
Name
(RefSeq) lissencephaly-1 homolog A
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00565
Ether lipid metabolism
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
120028240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120028240
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120028240
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120028240
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120028240
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
LisH
eIF2A
Nucleoporin_N
Pox_A_type_inc
ARMC9_LisH
DUF2570
LisH_2
DUF6813
Motif
Other DBs
NCBI-GeneID:
120028240
NCBI-ProteinID:
XP_038829334
UniProt:
A0A8U0TVG2
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All DBs
Position
Sna34:complement(19680841..19737429)
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AA seq
410 aa
AA seq
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MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPIAQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGMLVHPGGKFILSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKNAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacaacggcaacgagacgaactaaatcgagcgatagctgattatcttcgt
tccaatggatatgaagaggcttattcaactttcaagaaggaggccgaattagacatgaat
gaagaattggataagaagtatgctggccttttggaaaagaaatggacctcagtcatcaga
ttacaaaagaaggtgatggagctggagtcaaagctgaacgaggccaaggaggagatcacc
ttgggtgggcccatagcccagaagcgtgaccccaaagagtggatacctcgcccgccggag
aagtacgcgctgagcggccatcgttcccccgtcacacgtgtcatcttccacccagtcttc
agtgtcatggtgtctgcctccgaggacgccacaataaaggtatgggactatgagacagga
gactttgagcggacgctgaagggtcacacagactctgtccaggacatatcctttgaccat
actggcaagctgttggcctcctgctctgcagacatgaccatcaagctgtgggacttccag
ggctttgagtgcatcagaaccatgcatggacacgatcacaatgtttcatctgtagccatc
atgcccaatggagatcacatagtatctgcctcaagggacaaaaccattaaaatgtgggag
gtggccactggctactgtgtgaagacgttcacgggccacagggagtgggtgaggatggtc
cggcccaaccaggatggcacgctgatcgccagctgctccaacgaccagacggtgcgtgtg
tgggtggtggcgtccaaagagtgcaaggccgagctgcgggagcacgaacacgtggtggag
tgcatctcctgggcccctgagagcgcccatcccaccatcttggaggccaccggctcagag
tctaagaagagtggtaagccgggccctttcctgctgtctggctccagagacaagaccatc
aagatgtgggatgtcagcattggaatgtgccttatgacactggttggccatgataactgg
gtgcgcgggatgcttgtccaccccggaggcaagttcatattaagctgtgctgacgacaag
accttaaggatctgggactacaagaacaagcgctgcatgaagaccctgagtgcccatgaa
cattttgtaacctctctggatttccacaagaatgctccgtatgtcgtcaccggaagcgta
gatcaaacagttaaagtgtgggagtgtcgctga
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