Salvelinus namaycush (lake trout): 120028332
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Entry
120028332 CDS
T07522
Name
(RefSeq) claudin-19-like isoform X1
KO
K06087
claudin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03272
Virion - Hepatitis viruses
snh04382
Cornified envelope formation
snh04514
Cell adhesion molecule (CAM) interaction
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120028332
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120028332
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120028332
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120028332
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120028332
04147 Exosome [BR:
snh04147
]
120028332
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120028332
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
120028332
Exosomal proteins of colorectal cancer cells
120028332
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF6223
Clc-like
Motif
Other DBs
NCBI-GeneID:
120028332
NCBI-ProteinID:
XP_038829471
UniProt:
A0A8U0TVK7
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All DBs
Position
34:1643382..1658130
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AA seq
224 aa
AA seq
DB search
MLLAFQVLGLSLGVIGWCLENSCTNSHSWRVRSHSGAVTTSNWQFEGLWMTCAATSLGSV
QCQRYKTVLGLPGYIQACRALMIIALLLGLASIIVSVLGLKCTKIGSTSEQAKGKIALTG
GSMFILSGLSTLTAVSWYAARVVQEFHDPFFAGVRFELGAGLYMGWGAACLAILGGVMLC
CSCKRGPPGPTTGGYSYNYSKTSGGQQIYRAAPVSESGSSKAYV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcttttagctttccaggtcctgggtctgtctttaggggtgattggctggtgtctggag
aacagctgcactaattcccattcctggagggtacgcagccattctggggctgtcacaacc
agcaactggcagttcgagggcctgtggatgacctgcgcagccacgtccctgggctctgtg
cagtgccagaggtacaagactgtactggggctaccaggctacatacaggcatgtcgagcc
ctgatgatcatcgctctgctcctgggtctagcgtccatcattgtgtcagtgctggggctg
aaatgcacaaagatcggcagcacttctgaacaggccaagggcaaaatcgctctgacaggc
ggaagcatgttcatcttatcaggtctttccaccttgactgctgtgtcatggtacgctgcg
cgggtggtgcaggagttccatgatccattctttgcaggagtaaggtttgaactgggtgca
ggtctatacatgggttggggagctgcctgtttggccattctaggtggggtcatgctctgc
tgttcctgtaagaggggtccaccaggaccaaccacagggggatattcatacaactactcc
aaaacaagcggtggacaacagatctacagggcagcacctgtgtcagagtctgggagttca
aaagcttatgtttaa
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